DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AITST
Uniprot ID:
Q05586
Source protein:
Glutamate receptor ionotropic, NMDA 1
Source gene:
GRIN1
Class:
DEG_SPOP_SBC_1
Location:
882:886
E3 ligase:
SPOP
DEGRON score:
0.8412
ASA_SCORE:
80.42
COIL:
0.5022
CONS_SCORE:
0.3048
DSS_SCORE:
0.558
HELIX:
0.473
FCONS_SCORE:
0.9197
RIG_SCORE:
0.7763
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R880Q
TCGA-EE-A3JI
SKCM
TCGA
AITST
DEG_SPOP_SBC_1
0.2778
p.D890N
DO514
BLCA
ICGC
AITST
DEG_SPOP_SBC_1
0.6667
p.R877W
DO645
BLCA
ICGC
AITST
DEG_SPOP_SBC_1
0.3056
p.L872R
DO9698
COAD
ICGC
AITST
DEG_SPOP_SBC_1
0.0556
p.Y886C
DO219841
LGG
ICGC
AITST
DEG_SPOP_SBC_1
0.7087
p.A876T
DO44879
LIHC
ICGC
AITST
DEG_SPOP_SBC_1
0.2778
p.G893V
DO219184
LUSC
ICGC
AITST
DEG_SPOP_SBC_1
0.1389
p.V896L
DO28119
OV
ICGC
AITST
DEG_SPOP_SBC_1
0.5
p.G881S
DO37567
SKCM
ICGC
AITST
DEG_SPOP_SBC_1
0.3056
p.R895M
DO48009
STAD
ICGC
AITST
DEG_SPOP_SBC_1
0.0833
p.V876I
SIDM02013
Colorectal Carcinoma
GDSC
AITST
DEG_SPOP_SBC_1
0.2778
p.R894H
SNU-C2B
large_intestine
COSMIC
AITST
DEG_SPOP_SBC_1
0.1111
p.A882P
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
AITST
DEG_SPOP_SBC_1
0.6392
Drug responses associated with GRIN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AITST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1685:1689
AITST
SPOP
0.8556
More...
Q05586
Glutamate receptor ionotropic, NMDA 1
DEG_SPOP_SBC_1
882:886
AITST
SPOP
0.8412
More...
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
1963:1967
AITST
SPOP
0.998
More...