DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AQTSS
Uniprot ID:
P55283
Source protein:
Cadherin-4
Source gene:
CDH4
Class:
DEG_SPOP_SBC_1
Location:
122:126
E3 ligase:
SPOP
DEGRON score:
0.6933
ASA_SCORE:
64.5
COIL:
0.621
CONS_SCORE:
0.4037
DSS_SCORE:
0.478
HELIX:
0.015
FCONS_SCORE:
0.9444
RIG_SCORE:
0.6642
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P133L
TCGA-06-5416
GBM
TCGA
AQTSS
DEG_SPOP_SBC_1
0.1389
p.P133L
TCGA-95-7043
LUAD
TCGA
AQTSS
DEG_SPOP_SBC_1
0.1389
p.H131N
TCGA-33-4566
LUSC
TCGA
AQTSS
DEG_SPOP_SBC_1
0.1944
p.A115S
TCGA-55-8615
LUAD
TCGA
AQTSS
DEG_SPOP_SBC_1
0.1389
p.H128Y
TCGA-62-8402
LUAD
TCGA
AQTSS
DEG_SPOP_SBC_1
0.2778
p.W113L
TCGA-94-A5I4
LUSC
TCGA
AQTSS
DEG_SPOP_SBC_1
0.0833
p.R118Q
TCGA-AF-6136
READ
TCGA
AQTSS
DEG_SPOP_SBC_1
0.2222
p.Q123R
TCGA-CK-6746
COAD
TCGA
AQTSS
DEG_SPOP_SBC_1
0.6218
p.G136R
TCGA-QC-A7B5
SARC
TCGA
AQTSS
DEG_SPOP_SBC_1
0.0556
p.G136E
TCGA-QC-A7B5
SARC
TCGA
AQTSS
DEG_SPOP_SBC_1
0.0556
p.Y131H
DO217887
BRCA
ICGC
AQTSS
DEG_SPOP_SBC_1
0.1944
p.S121Y
DO2425
BRCA
ICGC
AQTSS
DEG_SPOP_SBC_1
0.3056
p.R130W
DO4677
BRCA
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2222
p.R130W
DO10340
COAD
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2222
p.R130W
DO7776
COAD
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2222
p.R130W
SNU-1040
large_intestine
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.2222
p.R120Q
DO229381
BTCA
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2778
p.P113L
DO8192
COAD
ICGC
AQTSS
DEG_SPOP_SBC_1
0.0833
p.P113L
DO47401
SKCM
ICGC
AQTSS
DEG_SPOP_SBC_1
0.0833
p.R130Q
DO7780
COAD
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2222
p.R130Q
DO22111
LGG
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2222
p.T134M
DO222789
ESCA
ICGC
AQTSS
DEG_SPOP_SBC_1
0.1111
p.Q115K
DO228907
LICA
ICGC
AQTSS
DEG_SPOP_SBC_1
0.1389
p.R120W
DO32267
OV
ICGC
AQTSS
DEG_SPOP_SBC_1
0.2778
p.P113S
DO37406
SKCM
ICGC
AQTSS
DEG_SPOP_SBC_1
0.0833
p.S125W
SIDM00948
Burkitt's Lymphoma
GDSC
AQTSS
DEG_SPOP_SBC_1
0.7874
p.S125W
SIDM01398
Melanoma
GDSC
AQTSS
DEG_SPOP_SBC_1
0.7874
p.S125W
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.7874
p.A115T
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
AQTSS
DEG_SPOP_SBC_1
0.1389
p.A115T
NCI-H2342
lung
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.1389
p.W113C
SIDM01664
Prostate Carcinoma
GDSC
AQTSS
DEG_SPOP_SBC_1
0.0833
p.W113C
ACH-000952
Prostate Cancer
CCLE
AQTSS
DEG_SPOP_SBC_1
0.0833
p.V116L
ACH-000790
Lung Cancer
CCLE
AQTSS
DEG_SPOP_SBC_1
0.1667
p.K123R
HEC-1
endometrium
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.7237
p.P128L
NCI-H720
lung
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.2778
p.D122N
RVH-421
skin
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.6932
p.S132F
SW684
soft_tissue
COSMIC
AQTSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with CDH4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AQTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55283
Cadherin-4
DEG_SPOP_SBC_1
122:126
AQTSS
SPOP
0.6933
More...
Q14028
Cyclic nucleotide-gated cation channel beta-1
DEG_SPOP_SBC_1
241:245
AQTSS
SPOP
0.9093
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10774:10778
AQTSS
SPOP
0.5997
More...