DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AYSST
Uniprot ID:
Q99569
Source protein:
Plakophilin-4
Source gene:
PKP4
Class:
DEG_SPOP_SBC_1
Location:
260:264
E3 ligase:
SPOP
DEGRON score:
0.9665
ASA_SCORE:
66.92
COIL:
0.8028
CONS_SCORE:
0.3119
DSS_SCORE:
0.5813
HELIX:
0.1218
FCONS_SCORE:
0.952
RIG_SCORE:
0.6678
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R270W
TCGA-A5-A0G2
UCEC
TCGA
AYSST
DEG_SPOP_SBC_1
0.1667
p.R270W
DO233699
GACA
ICGC
AYSST
DEG_SPOP_SBC_1
0.1667
p.R270W
DO41235
UCEC
ICGC
AYSST
DEG_SPOP_SBC_1
0.1667
p.D252N
TCGA-A8-A09N
BRCA
TCGA
AYSST
DEG_SPOP_SBC_1
0.1111
p.D252N
TCGA-D5-6928
COAD
TCGA
AYSST
DEG_SPOP_SBC_1
0.1111
p.D252N
DO5081
BRCA
ICGC
AYSST
DEG_SPOP_SBC_1
0.1111
p.D252N
DO7776
COAD
ICGC
AYSST
DEG_SPOP_SBC_1
0.1111
p.A271T
TCGA-CD-A4MG
STAD
TCGA
AYSST
DEG_SPOP_SBC_1
0.1389
p.A271T
DO48009
STAD
ICGC
AYSST
DEG_SPOP_SBC_1
0.1389
p.S263F
TCGA-FR-A728
SKCM
TCGA
AYSST
DEG_SPOP_SBC_1
0.7982
p.S263F
TCGA-W3-AA1R
SKCM
TCGA
AYSST
DEG_SPOP_SBC_1
0.7982
p.S263F
DO48550
SKCM
ICGC
AYSST
DEG_SPOP_SBC_1
0.7982
p.S263F
DO51275
SKCM
ICGC
AYSST
DEG_SPOP_SBC_1
0.7982
p.P258S
TCGA-IH-A3EA
SKCM
TCGA
AYSST
DEG_SPOP_SBC_1
0.2778
p.P258S
DO37667
SKCM
ICGC
AYSST
DEG_SPOP_SBC_1
0.2778
p.P258L
TCGA-IH-A3EA
SKCM
TCGA
AYSST
DEG_SPOP_SBC_1
0.2778
p.P258L
DO37667
SKCM
ICGC
AYSST
DEG_SPOP_SBC_1
0.2778
p.R254Q
DO223020
ESCA
ICGC
AYSST
DEG_SPOP_SBC_1
0.1667
p.S259I
DO229034
LICA
ICGC
AYSST
DEG_SPOP_SBC_1
0.75
p.A272T
SIDM01090
Colorectal Carcinoma
GDSC
AYSST
DEG_SPOP_SBC_1
0.1111
p.A272T
ACH-000943
Colon/Colorectal Cancer
CCLE
AYSST
DEG_SPOP_SBC_1
0.1111
p.A272T
RKO
large_intestine
COSMIC
AYSST
DEG_SPOP_SBC_1
0.1111
p.A268T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
AYSST
DEG_SPOP_SBC_1
0.2222
p.A268T
ACH-002256
Leukemia
CCLE
AYSST
DEG_SPOP_SBC_1
0.2222
p.A268T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
AYSST
DEG_SPOP_SBC_1
0.2222
p.R270Q
SIDM00568
Gastric Carcinoma
GDSC
AYSST
DEG_SPOP_SBC_1
0.1667
p.R270Q
ACH-000247
Gastric Cancer
CCLE
AYSST
DEG_SPOP_SBC_1
0.1667
p.R270Q
OCUM-1
stomach
COSMIC
AYSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PKP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AYSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3422:3426
AYSST
SPOP
0.7097
More...
Q99569
Plakophilin-4
DEG_SPOP_SBC_1
260:264
AYSST
SPOP
0.9665
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
165:169
AYSST
SPOP
0.792
More...