DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGFNS
Uniprot ID:
Q96II8
Source protein:
DISP complex protein LRCH3
Source gene:
LRCH3
Class:
DEG_SCF_TRCP1_1
Location:
310:315
E3 ligase:
BTRC
DEGRON score:
0.9881
ASA_SCORE:
52.45
COIL:
0.624
CONS_SCORE:
0.4024
DSS_SCORE:
0.4363
HELIX:
0.2787
FCONS_SCORE:
1.0652
RIG_SCORE:
0.6642
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R322I
TCGA-A5-A1OF
UCEC
TCGA
DSGFNS
DEG_SCF_TRCP1_1
0.1389
p.R322I
DO42568
UCEC
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.1389
p.N314S
TCGA-CW-5580
KIRC
TCGA
DSGFNS
DEG_SCF_TRCP1_1
0.5958
p.N314S
DO19208
KIRC
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.5958
p.L309V
DO52605
BOCA
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.3056
p.N319K
DO51634
CESC
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.2222
p.F320V
DO6308
CESC
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.1944
p.A308S
DO229028
LICA
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.2778
p.S318C
DO50828
LICA
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.6944
p.R325I
DO36556
READ
ICGC
DSGFNS
DEG_SCF_TRCP1_1
0.0556
p.S318N
SIDM00585
Hepatocellular Carcinoma
GDSC
DSGFNS
DEG_SCF_TRCP1_1
0.6944
p.S318N
ACH-000480
Liver Cancer
CCLE
DSGFNS
DEG_SCF_TRCP1_1
0.6944
p.S318N
ACH-000985
Colon/Colorectal Cancer
CCLE
DSGFNS
DEG_SCF_TRCP1_1
0.6944
p.S318N
HuH-7
liver
COSMIC
DSGFNS
DEG_SCF_TRCP1_1
0.6944
p.S303R
SIDM00410
Other Blood Cancers
GDSC
DSGFNS
DEG_SCF_TRCP1_1
0.1389
p.S303R
ACH-002317
Leukemia
CCLE
DSGFNS
DEG_SCF_TRCP1_1
0.1389
p.S303R
YT
haematopoietic_and_lymphoid_tissue
COSMIC
DSGFNS
DEG_SCF_TRCP1_1
0.1389
p.R324H
no-11
central_nervous_system
COSMIC
DSGFNS
DEG_SCF_TRCP1_1
0.5278
p.R318M
OC-314
ovary
COSMIC
DSGFNS
DEG_SCF_TRCP1_1
0.6944
Drug responses associated with LRCH3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGFNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q4G163
F-box only protein 43
DEG_SCF_TRCP1_1
333:338
DSGFNS
BTRC
0.999
More...
Q96II8
DISP complex protein LRCH3
DEG_SCF_TRCP1_1
310:315
DSGFNS
BTRC
0.9881
More...
Q9P2F5
Storkhead-box protein 2
DEG_SCF_TRCP1_1
855:860
DSGFNS
BTRC
0.992
More...