DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGGGS
Uniprot ID:
Q96T37
Source protein:
RNA-binding protein 15
Source gene:
RBM15
Class:
DEG_SCF_TRCP1_1
Location:
89:94
E3 ligase:
BTRC
DEGRON score:
0.9617
ASA_SCORE:
74.35
COIL:
0.9582
CONS_SCORE:
0.2948
DSS_SCORE:
0.7183
HELIX:
0.023
FCONS_SCORE:
0.9361
RIG_SCORE:
0.501
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D89N
TCGA-KQ-A41S
BLCA
TCGA
DSGGGS
DEG_SCF_TRCP1_1
0.6932
p.D89N
DO223593
BLCA
ICGC
DSGGGS
DEG_SCF_TRCP1_1
0.6932
p.G92S
DO223460
CLLE
ICGC
DSGGGS
DEG_SCF_TRCP1_1
0.5882
p.S103F
ACH-000969
Colon/Colorectal Cancer
CCLE
DSGGGS
DEG_SCF_TRCP1_1
0.5278
p.S94A
ACH-001047
Lung Cancer
CCLE
DSGGGS
DEG_SCF_TRCP1_1
0.7588
Drug responses associated with RBM15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGGGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96T37
RNA-binding protein 15
DEG_SCF_TRCP1_1
89:94
DSGGGS
BTRC
0.9617
More...
Q9Y462
Zinc finger protein 711
DEG_SCF_TRCP1_1
2:7
DSGGGS
BTRC
0.9877
More...
Q6NY19
KN motif and ankyrin repeat domain-containing protein 3
DEG_SCF_TRCP1_1
509:514
DSGGGS
BTRC
0.997
More...