DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSGS
Uniprot ID:
Q9Y3Q8
Source protein:
TSC22 domain family protein 4
Source gene:
TSC22D4
Class:
DEG_SCF_TRCP1_1
Location:
309:314
E3 ligase:
BTRC
DEGRON score:
0.9299
ASA_SCORE:
52.7667
COIL:
0.8163
CONS_SCORE:
0.4247
DSS_SCORE:
0.4001
HELIX:
0.1138
FCONS_SCORE:
0.8148
RIG_SCORE:
0.6107
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S306N
TCGA-91-6829
LUAD
TCGA
DSGSGS
DEG_SCF_TRCP1_1
0.6944
p.S306N
DO23564
LUAD
ICGC
DSGSGS
DEG_SCF_TRCP1_1
0.6944
p.Q324K
TCGA-BP-4163
KIRC
TCGA
DSGSGS
DEG_SCF_TRCP1_1
0.0556
p.Q324K
TCGA-QF-A5YS
UCEC
TCGA
DSGSGS
DEG_SCF_TRCP1_1
0.0556
p.Q324K
SIDM01294
Esophageal Carcinoma
GDSC
DSGSGS
DEG_SCF_TRCP1_1
0.0556
p.Q324K
SIDM01957
Esophageal Carcinoma
GDSC
DSGSGS
DEG_SCF_TRCP1_1
0.0556
p.D308Y
TCGA-K4-A54R
BLCA
TCGA
DSGSGS
DEG_SCF_TRCP1_1
0.3056
p.E323K
DO37074
READ
ICGC
DSGSGS
DEG_SCF_TRCP1_1
0.0833
p.D308N
SIDM01090
Colorectal Carcinoma
GDSC
DSGSGS
DEG_SCF_TRCP1_1
0.3056
p.D308N
SIDM00027
Kidney Carcinoma
GDSC
DSGSGS
DEG_SCF_TRCP1_1
0.3056
p.D308N
SIDM01316
Ewing's Sarcoma
GDSC
DSGSGS
DEG_SCF_TRCP1_1
0.3056
Drug responses associated with TSC22D4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VSY0
G kinase-anchoring protein 1
DEG_SCF_TRCP1_1
22:27
DSGSGS
BTRC
0.9941
More...
Q9UPN3
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
DEG_SCF_TRCP1_1
6405:6410
DSGSGS
BTRC
0.7925
More...
Q9Y3Q8
TSC22 domain family protein 4
DEG_SCF_TRCP1_1
309:314
DSGSGS
BTRC
0.9299
More...