DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSSSS
Uniprot ID:
Q8IYD1
Source protein:
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
Source gene:
GSPT2
Class:
DEG_SCF_TRCP1_1
Location:
2:8
E3 ligase:
BTRC
DEGRON score:
0.8884
ASA_SCORE:
86.5571
COIL:
0.9367
CONS_SCORE:
0.1654
DSS_SCORE:
0.9033
HELIX:
0.057
FCONS_SCORE:
0.8091
RIG_SCORE:
0.5378
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C14Y
TCGA-DF-A2KN
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.1667
p.C14Y
DO223282
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.1667
p.S3L
TCGA-E6-A1LX
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.8778
p.S3L
DO41020
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.8778
p.S3L
SIDM01619
Endometrial Carcinoma
GDSC
DSGSSSS
DEG_SCF_TRCP1_1
0.8778
p.S3L
ACH-000984
Endometrial/Uterine Cancer
CCLE
DSGSSSS
DEG_SCF_TRCP1_1
0.8778
p.D16N
DO227999
COCA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.1111
p.G4D
DO50970
LICA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.7198
p.V18E
DO222880
MELA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.0556
p.A11V
DO228142
PBCA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.25
p.S10L
SIDM01617
Endometrial Carcinoma
GDSC
DSGSSSS
DEG_SCF_TRCP1_1
0.2778
p.S10L
ACH-000994
Endometrial/Uterine Cancer
CCLE
DSGSSSS
DEG_SCF_TRCP1_1
0.2778
p.D9N
ACH-000809
Esophageal Cancer
CCLE
DSGSSSS
DEG_SCF_TRCP1_1
0.3056
p.Q17R
ACH-000985
Colon/Colorectal Cancer
CCLE
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
Drug responses associated with GSPT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SCF_TRCP1_1
495:501
DSGSSSS
BTRC
0.9422
More...
Q8IYD1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
DEG_SCF_TRCP1_1
2:8
DSGSSSS
BTRC
0.8884
More...
Q8NFP9
Neurobeachin
DEG_SCF_TRCP1_1
1844:1850
DSGSSSS
BTRC
0.9964
More...