DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSSSS
Uniprot ID:
Q8NFP9
Source protein:
Neurobeachin
Source gene:
NBEA
Class:
DEG_SCF_TRCP1_1
Location:
1844:1850
E3 ligase:
BTRC
DEGRON score:
0.9964
ASA_SCORE:
73.1143
COIL:
0.9336
CONS_SCORE:
0.2867
DSS_SCORE:
0.4814
HELIX:
0.0401
FCONS_SCORE:
1.0209
RIG_SCORE:
0.5743
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1860V
TCGA-AP-A1DK
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.0556
p.A1860V
DO42033
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.0556
p.S1848F
TCGA-AX-A2IO
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.6871
p.S1835I
TCGA-B5-A0JY
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
p.S1835I
TCGA-EO-A22X
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
p.S1835I
DO43041
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
p.S1835I
DO43907
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
p.T1839I
TCGA-DF-A2KU
UCEC
TCGA
DSGSSSS
DEG_SCF_TRCP1_1
0.1944
p.T1839I
DO223286
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.1944
p.S1847C
DO225334
BRCA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.643
p.M1836V
DO234239
ESAD
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.1111
p.S1845P
DO233787
GACA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.6752
p.T1840K
DO232045
ORCA
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.2222
p.S1845F
DO40800
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.7982
p.S1859G
DO52402
UCEC
ICGC
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
p.S1835C
SIDM02073
Colorectal Carcinoma
GDSC
DSGSSSS
DEG_SCF_TRCP1_1
0.0833
p.T1840A
SIDM02048
Colorectal Carcinoma
GDSC
DSGSSSS
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with NBEA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SCF_TRCP1_1
495:501
DSGSSSS
BTRC
0.9422
More...
Q8IYD1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
DEG_SCF_TRCP1_1
2:8
DSGSSSS
BTRC
0.8884
More...
Q8NFP9
Neurobeachin
DEG_SCF_TRCP1_1
1844:1850
DSGSSSS
BTRC
0.9964
More...