DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGTSS
Uniprot ID:
A5PKW4
Source protein:
PH and SEC7 domain-containing protein 1
Source gene:
PSD
Class:
DEG_SCF_TRCP1_1
Location:
467:472
E3 ligase:
BTRC
DEGRON score:
0.8696
ASA_SCORE:
71.5667
COIL:
0.8688
CONS_SCORE:
0.2568
DSS_SCORE:
0.8191
HELIX:
0.1008
FCONS_SCORE:
0.9733
RIG_SCORE:
0.5123
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A473P
TCGA-44-2656
LUAD
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.A473P
DO26052
LUAD
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.Q480H
TCGA-78-7540
LUAD
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.Q480H
DO23810
LUAD
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.A462S
TCGA-A6-5661
COAD
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.1944
p.A462S
DO8634
COAD
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.1944
p.G482V
TCGA-ER-A19G
SKCM
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.0556
p.G482V
DO47284
SKCM
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.0556
p.S468Y
TCGA-F5-6814
READ
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.712
p.S468Y
DO36556
READ
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.712
p.A459T
TCGA-HZ-A49I
PAAD
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.A459T
TCGA-KK-A5A1
PRAD
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.A459T
TCGA-KV-A74V
KIRP
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.A459T
DO48480
KIRP
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.A459T
DO32790
PAAD
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.A459T
DO49845
PRAD
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.1111
p.T479A
TCGA-KR-A7K0
LIHC
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.1389
p.T479A
DO49696
LIHC
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.1389
p.P463H
TCGA-KV-A74V
KIRP
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.2222
p.P463H
DO48480
KIRP
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.2222
p.A473V
TCGA-Z7-A8R6
BRCA
TCGA
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.A473V
DO51231
BRCA
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.G482R
DO52651
MALY
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.0556
p.P458S
DO222418
MELA
ICGC
DSGTSS
DEG_SCF_TRCP1_1
0.0833
p.P466L
SIDM01004
Chronic Myelogenous Leukemia
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.P466L
ACH-000983
Leukemia
CCLE
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.P466L
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
DSGTSS
DEG_SCF_TRCP1_1
0.3056
p.A462T
SIDM00216
Colorectal Carcinoma
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.1944
p.A462T
ACH-000989
Colon/Colorectal Cancer
CCLE
DSGTSS
DEG_SCF_TRCP1_1
0.1944
p.A462T
SNU-175
large_intestine
COSMIC
DSGTSS
DEG_SCF_TRCP1_1
0.1944
p.G469V
SIDM00705
Non-Cancerous
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.7532
p.G469V
SIDM00712
Non-Cancerous
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.7532
p.G469V
SIDM00696
Non-Cancerous
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.7532
p.G469V
SIDM00772
Breast Carcinoma
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.7532
p.G469V
SIDM00713
Mesothelioma
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.7532
p.G469V
SIDM00792
Small Cell Lung Carcinoma
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.7532
p.G482E
SIDM01059
Melanoma
GDSC
DSGTSS
DEG_SCF_TRCP1_1
0.0556
p.G482E
ACH-000915
Skin Cancer
CCLE
DSGTSS
DEG_SCF_TRCP1_1
0.0556
p.G482E
IPC-298
skin
COSMIC
DSGTSS
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with PSD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A5PKW4
PH and SEC7 domain-containing protein 1
DEG_SCF_TRCP1_1
467:472
DSGTSS
BTRC
0.8696
More...
O94901
SUN domain-containing protein 1
DEG_SCF_TRCP1_1
74:79
DSGTSS
BTRC
0.9911
More...
Q9UIF8
Bromodomain adjacent to zinc finger domain protein 2B
DEG_SCF_TRCP1_1
248:253
DSGTSS
BTRC
0.9889
More...