DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
DSGVGAS
Uniprot ID:
Q96QB1
Source protein:
Rho GTPase-activating protein 7
Source gene:
DLC1
Class:
DEG_SCF_TRCP1_1
Location:
985:991
E3 ligase:
BTRC
DEGRON score:
0.9965
ASA_SCORE:
64.9429
COIL:
0.8437
CONS_SCORE:
0.378
DSS_SCORE:
0.6619
HELIX:
0.081
FCONS_SCORE:
1.0003
RIG_SCORE:
0.6095
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R994M
TCGA-44-7670
LUAD
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.25
p.R994M
DO23555
LUAD
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.25
p.G987V
TCGA-86-8358
LUAD
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.7532
p.G987V
DO25471
LUAD
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.7532
p.G987A
TCGA-A2-A0D0
BRCA
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.754
p.H998R
TCGA-B5-A11E
UCEC
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.1389
p.H998R
DO41644
UCEC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.1389
p.R984S
TCGA-CN-A63U
HNSC
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.3056
p.R984S
DO44454
HNSC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.3056
p.A990S
TCGA-D1-A163
UCEC
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.6477
p.G989V
TCGA-EE-A3AA
SKCM
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.6421
p.H985Y
DO51920
BLCA
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.7229
p.R994I
DO222562
MELA
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.25
p.A994V
DO41752
UCEC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.25
p.H998Q
SIDM00014
Colorectal Carcinoma
GDSC
DSGVGAS
DEG_SCF_TRCP1_1
0.1389
p.R1001Q
HT-115
large_intestine
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.0556
p.P986L
SW684
soft_tissue
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.7582
p.V991A
SNU-1040
large_intestine
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.6936
p.R1001W
SNU-1040
large_intestine
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.0556
p.A987S
NCI-H441
lung
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.7588
Drug responses associated with DLC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVGAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92502
StAR-related lipid transfer protein 8
DEG_SCF_TRCP1_1
480:486
DSGVGAS
BTRC
0.9959
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SCF_TRCP1_1
985:991
DSGVGAS
BTRC
0.9965
More...
Q9Y3M8
StAR-related lipid transfer protein 13
DEG_SCF_TRCP1_1
571:577
DSGVGAS
BTRC
0.9984
More...