DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGVGAS
Uniprot ID:
Q9Y3M8
Source protein:
StAR-related lipid transfer protein 13
Source gene:
STARD13
Class:
DEG_SCF_TRCP1_1
Location:
571:577
E3 ligase:
BTRC
DEGRON score:
0.9984
ASA_SCORE:
62.0286
COIL:
0.8357
CONS_SCORE:
0.3781
DSS_SCORE:
0.6654
HELIX:
0.072
FCONS_SCORE:
1.0668
RIG_SCORE:
0.6282
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V574G
TCGA-D3-A3MR
SKCM
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.6421
p.P581T
TCGA-X6-A7WA
SARC
TCGA
DSGVGAS
DEG_SCF_TRCP1_1
0.2222
p.G578C
DO229473
LAML
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.3056
p.S571R
DO228923
LICA
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.7427
p.R581H
DO220911
MELA
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.2222
p.L579F
DO222413
MELA
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.2778
p.D575N
DO37814
SKCM
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.6932
p.D575N
DO42280
UCEC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.6932
p.L574P
DO38619
STAD
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.7582
p.D575Y
DO229227
THCA
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.7325
p.S587Y
DO52412
UCEC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.0556
p.R570C
DO41235
UCEC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.3056
p.R570H
DO42673
UCEC
ICGC
DSGVGAS
DEG_SCF_TRCP1_1
0.3056
p.S561I
HT-115
large_intestine
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.0556
p.L584P
LS-180
large_intestine
COSMIC
DSGVGAS
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with STARD13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVGAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92502
StAR-related lipid transfer protein 8
DEG_SCF_TRCP1_1
480:486
DSGVGAS
BTRC
0.9959
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SCF_TRCP1_1
985:991
DSGVGAS
BTRC
0.9965
More...
Q9Y3M8
StAR-related lipid transfer protein 13
DEG_SCF_TRCP1_1
571:577
DSGVGAS
BTRC
0.9984
More...