DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVGRT
Uniprot ID:
Q6ZMN7
Source protein:
PDZ domain-containing RING finger protein 4
Source gene:
PDZRN4
Class:
DEG_SCF_TRCP1_1
Location:
552:558
E3 ligase:
BTRC
DEGRON score:
0.9956
ASA_SCORE:
69.2143
COIL:
0.7981
CONS_SCORE:
0.5215
DSS_SCORE:
0.7681
HELIX:
0.069
FCONS_SCORE:
1.1742
RIG_SCORE:
0.5671
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R563Q
TCGA-AA-3510
COAD
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-AA-A00N
COAD
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-AA-A010
COAD
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-AJ-A3EL
UCEC
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-B5-A11E
UCEC
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-D3-A5GO
SKCM
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-EE-A2MT
SKCM
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
TCGA-GN-A8LK
SKCM
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO225103
BRCA
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO7783
COAD
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO9876
COAD
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO222699
MELA
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO47419
SKCM
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO38051
SKCM
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO51259
SKCM
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO41644
UCEC
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
DO41542
UCEC
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
SIDM01611
Endometrial Carcinoma
GDSC
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.R563Q
ACH-000996
Endometrial/Uterine Cancer
CCLE
DSGVGRT
DEG_SCF_TRCP1_1
0.1944
p.S561I
TCGA-AP-A0LM
UCEC
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.25
p.S561I
DO229027
LICA
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.25
p.S561I
DO43306
UCEC
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.25
p.G554V
TCGA-BS-A0UF
UCEC
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.7532
p.G554V
DO41488
UCEC
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.7532
p.E560K
TCGA-W3-AA1W
SKCM
TCGA
DSGVGRT
DEG_SCF_TRCP1_1
0.2778
p.E560K
DO51277
SKCM
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.2778
p.R557C
DO233791
GACA
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.719
p.D559E
DO48736
LIRI
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.3056
p.D565N
DO222390
MELA
ICGC
DSGVGRT
DEG_SCF_TRCP1_1
0.1389
p.S553I
SIDM01782
Oral Cavity Carcinoma
GDSC
DSGVGRT
DEG_SCF_TRCP1_1
0.7341
Drug responses associated with PDZRN4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVGRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ7
E3 ubiquitin-protein ligase PDZRN3
DEG_SCF_TRCP1_1
568:574
DSGVGRT
BTRC
0.993
More...
Q6ZMN7
PDZ domain-containing RING finger protein 4
DEG_SCF_TRCP1_1
552:558
DSGVGRT
BTRC
0.9956
More...
Q76G19
PDZ domain-containing protein 4
DEG_SCF_TRCP1_1
277:283
DSGVGRT
BTRC
0.9927
More...