DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EKENT
Uniprot ID:
Q9NYW8
Source protein:
RB-associated KRAB zinc finger protein
Source gene:
RBAK
Class:
DEG_APCC_KENBOX_2
Location:
113:117
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9717
ASA_SCORE:
101.84
COIL:
0.7704
CONS_SCORE:
0.2912
DSS_SCORE:
0.3551
HELIX:
0.1422
FCONS_SCORE:
0.8383
RIG_SCORE:
0.7937
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E115Q
TCGA-D8-A1J9
BRCA
TCGA
EKENT
DEG_APCC_KENBOX_2
0.6744
p.E115Q
DO2067
BRCA
ICGC
EKENT
DEG_APCC_KENBOX_2
0.6744
p.T111S
DO227844
COCA
ICGC
EKENT
DEG_APCC_KENBOX_2
0.2778
p.T111S
SIDM00087
Plasma Cell Myeloma
GDSC
EKENT
DEG_APCC_KENBOX_2
0.2778
p.T111S
ACH-000817
Myeloma
CCLE
EKENT
DEG_APCC_KENBOX_2
0.2778
p.T111S
RPMI-8226
haematopoietic_and_lymphoid_tissue
COSMIC
EKENT
DEG_APCC_KENBOX_2
0.2778
p.T117A
DO233784
GACA
ICGC
EKENT
DEG_APCC_KENBOX_2
0.6028
p.C104F
DO229019
LICA
ICGC
EKENT
DEG_APCC_KENBOX_2
0.0833
p.C104F
DO229038
LICA
ICGC
EKENT
DEG_APCC_KENBOX_2
0.0833
p.L127F
SIDM00541
Colorectal Carcinoma
GDSC
EKENT
DEG_APCC_KENBOX_2
0.0556
p.L127F
ACH-000926
Colon/Colorectal Cancer
CCLE
EKENT
DEG_APCC_KENBOX_2
0.0556
p.L127F
HT55
large_intestine
COSMIC
EKENT
DEG_APCC_KENBOX_2
0.0556
p.N106S
SIDM00878
Breast Carcinoma
GDSC
EKENT
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with RBAK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z7C8
Transcription initiation factor TFIID subunit 8
DEG_APCC_KENBOX_2
266:270
EKENT
APC,CDC20,FZR1
0.9531
More...
Q9NYW8
RB-associated KRAB zinc finger protein
DEG_APCC_KENBOX_2
113:117
EKENT
APC,CDC20,FZR1
0.9717
More...
Q6ZNC4
Zinc finger protein 704
DEG_APCC_KENBOX_2
47:51
EKENT
APC,CDC20,FZR1
0.7426
More...
Q9BVR0
Putative HERC2-like protein 3
DEG_APCC_KENBOX_2
1148:1152
EKENT
APC,CDC20,FZR1
0.6285
More...