DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FVPYRD
Uniprot ID:
O95239
Source protein:
Chromosome-associated kinesin KIF4A
Source gene:
KIF4A
Class:
LIG_APCC_ABBA_1
Location:
285:290
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8086
ASA_SCORE:
62.9667
COIL:
0.7075
CONS_SCORE:
0.6567
DSS_SCORE:
0.2816
HELIX:
0.2165
FCONS_SCORE:
0.9847
RIG_SCORE:
0.8309
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R289I
TCGA-AJ-A3EL
UCEC
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.6991
p.R289I
DO41542
UCEC
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.6991
p.A276V
TCGA-EO-A3B0
UCEC
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.0833
p.A276V
DO219773
UCEC
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.0833
p.K292T
TCGA-F4-6570
COAD
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.7222
p.K292T
DO10443
COAD
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.7222
p.R295G
TCGA-GC-A6I3
BLCA
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.1944
p.R295G
DO219025
BLCA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.1944
p.D280Y
TCGA-UY-A78N
BLCA
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.1944
p.D280Y
DO219034
BLCA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.1944
p.K282N
DO229026
LICA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.3611
Drug responses associated with KIF4A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FVPYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95239
Chromosome-associated kinesin KIF4A
LIG_APCC_ABBA_1
285:290
FVPYRD
APC,CDC20,FZR1
0.8086
More...
Q96L93
Kinesin-like protein KIF16B
LIG_APCC_ABBA_1
307:312
FVPYRD
APC,CDC20,FZR1
0.814
More...
Q9NQT8
Kinesin-like protein KIF13B
LIG_APCC_ABBA_1
302:307
FVPYRD
APC,CDC20,FZR1
0.6264
More...