DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
FVPYRD
Uniprot ID:
Q96L93
Source protein:
Kinesin-like protein KIF16B
Source gene:
KIF16B
Class:
LIG_APCC_ABBA_1
Location:
307:312
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.814
ASA_SCORE:
46.2333
COIL:
0.5707
CONS_SCORE:
0.7715
DSS_SCORE:
0.0636
HELIX:
0.3548
FCONS_SCORE:
1.3186
RIG_SCORE:
0.8988
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K304M
TCGA-2Z-A9JL
KIRP
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.3611
p.K304M
DO219675
KIRP
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.3611
p.V308M
TCGA-A6-6653
COAD
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.6097
p.V308M
DO10373
COAD
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.6097
p.V308M
DO220856
MELA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.6097
p.K303N
TCGA-AX-A06F
UCEC
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.3333
p.K303N
DO41752
UCEC
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.3333
p.R311S
TCGA-D9-A148
SKCM
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.6316
p.R311S
DO37971
SKCM
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.6316
p.R311M
TCGA-EE-A2GT
SKCM
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.7521
p.R311M
TCGA-ER-A19B
SKCM
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.7521
p.R311M
DO47491
SKCM
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.7521
p.R311M
DO37946
SKCM
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.7521
p.N298D
SIDM00156
Neuroblastoma
GDSC
FVPYRD
LIG_APCC_ABBA_1
0.0833
p.N298D
ACH-002285
Neuroblastoma
CCLE
FVPYRD
LIG_APCC_ABBA_1
0.0833
p.N298D
NB7
autonomic_ganglia
COSMIC
FVPYRD
LIG_APCC_ABBA_1
0.0833
p.A301S
SIDM00292
Small Cell Lung Carcinoma
GDSC
FVPYRD
LIG_APCC_ABBA_1
0.1667
p.A301S
ACH-002077
Lung Cancer
CCLE
FVPYRD
LIG_APCC_ABBA_1
0.1667
p.A301S
LU-165
lung
COSMIC
FVPYRD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with KIF16B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FVPYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95239
Chromosome-associated kinesin KIF4A
LIG_APCC_ABBA_1
285:290
FVPYRD
APC,CDC20,FZR1
0.8086
More...
Q96L93
Kinesin-like protein KIF16B
LIG_APCC_ABBA_1
307:312
FVPYRD
APC,CDC20,FZR1
0.814
More...
Q9NQT8
Kinesin-like protein KIF13B
LIG_APCC_ABBA_1
302:307
FVPYRD
APC,CDC20,FZR1
0.6264
More...