DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
FVPYRD
Uniprot ID:
Q9NQT8
Source protein:
Kinesin-like protein KIF13B
Source gene:
KIF13B
Class:
LIG_APCC_ABBA_1
Location:
302:307
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6264
ASA_SCORE:
45.5333
COIL:
0.5742
CONS_SCORE:
0.7854
DSS_SCORE:
0.1899
HELIX:
0.2867
FCONS_SCORE:
1.2408
RIG_SCORE:
0.8689
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D292G
TCGA-34-7107
LUSC
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.0556
p.D292G
DO26449
LUSC
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.0556
p.K299N
TCGA-AG-A002
READ
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.3611
p.K299N
TCGA-F5-6814
READ
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.3611
p.K299N
DO36556
READ
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.3611
p.P304A
TCGA-BK-A0C9
UCEC
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.7503
p.P304A
DO41253
UCEC
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.7503
p.K301N
TCGA-CA-6717
COAD
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.3056
p.K301N
DO8264
COAD
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.3056
p.N300H
TCGA-EO-A22U
UCEC
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.2778
p.N300H
DO43755
UCEC
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.2778
p.P304L
TCGA-ER-A19F
SKCM
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.6471
p.P304L
DO37679
SKCM
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.6471
p.R306C
TCGA-ER-A2NE
SKCM
TCGA
FVPYRD
LIG_APCC_ABBA_1
0.719
p.R306C
DO233884
GACA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.719
p.R306C
DO233823
GACA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.719
p.R306C
DO48663
SKCM
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.719
p.R306H
DO233652
GACA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.7133
p.A295D
DO229036
LICA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.1389
p.D316E
DO229054
LICA
ICGC
FVPYRD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with KIF13B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FVPYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95239
Chromosome-associated kinesin KIF4A
LIG_APCC_ABBA_1
285:290
FVPYRD
APC,CDC20,FZR1
0.8086
More...
Q96L93
Kinesin-like protein KIF16B
LIG_APCC_ABBA_1
307:312
FVPYRD
APC,CDC20,FZR1
0.814
More...
Q9NQT8
Kinesin-like protein KIF13B
LIG_APCC_ABBA_1
302:307
FVPYRD
APC,CDC20,FZR1
0.6264
More...