DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IKENE
Uniprot ID:
Q6XYQ8
Source protein:
Synaptotagmin-10
Source gene:
SYT10
Class:
DEG_APCC_KENBOX_2
Location:
116:120
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6234
ASA_SCORE:
102.96
COIL:
0.5566
CONS_SCORE:
0.3767
DSS_SCORE:
0.5194
HELIX:
0.4258
FCONS_SCORE:
1.1087
RIG_SCORE:
0.7414
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V124I
TCGA-17-Z022
LUAD
TCGA
IKENE
DEG_APCC_KENBOX_2
0.2222
p.K117T
TCGA-78-7159
LUAD
TCGA
IKENE
DEG_APCC_KENBOX_2
0.7306
p.K117T
DO23568
LUAD
ICGC
IKENE
DEG_APCC_KENBOX_2
0.7306
p.A126S
TCGA-BP-4770
KIRC
TCGA
IKENE
DEG_APCC_KENBOX_2
0.1667
p.A126S
DO17779
KIRC
ICGC
IKENE
DEG_APCC_KENBOX_2
0.1667
p.E115D
TCGA-D3-A2JA
SKCM
TCGA
IKENE
DEG_APCC_KENBOX_2
0.3056
p.E115D
DO47652
SKCM
ICGC
IKENE
DEG_APCC_KENBOX_2
0.3056
p.A126D
TCGA-DX-A6YT
SARC
TCGA
IKENE
DEG_APCC_KENBOX_2
0.1667
p.A126D
DO220007
SARC
ICGC
IKENE
DEG_APCC_KENBOX_2
0.1667
p.E128G
TCGA-EE-A29G
SKCM
TCGA
IKENE
DEG_APCC_KENBOX_2
0.1111
p.E128G
DO47303
SKCM
ICGC
IKENE
DEG_APCC_KENBOX_2
0.1111
p.E118K
TCGA-EE-A2M5
SKCM
TCGA
IKENE
DEG_APCC_KENBOX_2
0.7022
p.E118K
DO220899
MELA
ICGC
IKENE
DEG_APCC_KENBOX_2
0.7022
p.E118K
DO37425
SKCM
ICGC
IKENE
DEG_APCC_KENBOX_2
0.7022
p.E128A
TCGA-MQ-A4LP
MESO
TCGA
IKENE
DEG_APCC_KENBOX_2
0.1111
p.E115K
TCGA-YG-AA3N
SKCM
TCGA
IKENE
DEG_APCC_KENBOX_2
0.3056
p.E115K
DO51298
SKCM
ICGC
IKENE
DEG_APCC_KENBOX_2
0.3056
p.E106D
DO233906
GACA
ICGC
IKENE
DEG_APCC_KENBOX_2
0.0556
p.P122A
SIDM00352
Ovarian Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00491
Thyroid Gland Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00607
Glioblastoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM01028
Esophageal Squamous Cell Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00351
Oral Cavity Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00562
Breast Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00239
Kidney Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM01018
Hodgkin's Lymphoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00381
Cervical Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P122A
SIDM00159
Biliary Tract Carcinoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.2778
p.P129L
SIDM00190
Melanoma
GDSC
IKENE
DEG_APCC_KENBOX_2
0.0833
p.P129L
ACH-002097
Skin Cancer
CCLE
IKENE
DEG_APCC_KENBOX_2
0.0833
p.P129L
CP66-MEL
skin
COSMIC
IKENE
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with SYT10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_APCC_KENBOX_2
2615:2619
IKENE
APC,CDC20,FZR1
0.9967
More...
Q6XYQ8
Synaptotagmin-10
DEG_APCC_KENBOX_2
116:120
IKENE
APC,CDC20,FZR1
0.6234
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_APCC_KENBOX_2
419:423
IKENE
APC,CDC20,FZR1
0.6842
More...