DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEIYNE
Uniprot ID:
Q96FN5
Source protein:
Kinesin-like protein KIF12
Source gene:
KIF12
Class:
LIG_APCC_ABBA_1
Location:
159:164
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5147
ASA_SCORE:
31.1667
COIL:
0.386
CONS_SCORE:
0.9844
DSS_SCORE:
0.0532
HELIX:
0.161
FCONS_SCORE:
1.3867
RIG_SCORE:
0.8856
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D169Y
TCGA-55-A490
LUAD
TCGA
LEIYNE
LIG_APCC_ABBA_1
0.1944
p.D169Y
DO24596
LUAD
ICGC
LEIYNE
LIG_APCC_ABBA_1
0.1944
p.E149Q
TCGA-85-A4QQ
LUSC
TCGA
LEIYNE
LIG_APCC_ABBA_1
0.0556
p.E149Q
DO45427
LUSC
ICGC
LEIYNE
LIG_APCC_ABBA_1
0.0556
p.S152N
TCGA-AA-A01P
COAD
TCGA
LEIYNE
LIG_APCC_ABBA_1
0.1389
p.S152N
DO8642
COAD
ICGC
LEIYNE
LIG_APCC_ABBA_1
0.1389
p.I153M
TCGA-CR-7370
HNSC
TCGA
LEIYNE
LIG_APCC_ABBA_1
0.1667
p.I153M
DO14426
HNSC
ICGC
LEIYNE
LIG_APCC_ABBA_1
0.1667
p.D169N
TCGA-EE-A2GR
SKCM
TCGA
LEIYNE
LIG_APCC_ABBA_1
0.1944
p.D169N
DO37996
SKCM
ICGC
LEIYNE
LIG_APCC_ABBA_1
0.1944
p.R155Q
TCGA-FI-A2D0
UCEC
TCGA
LEIYNE
LIG_APCC_ABBA_1
0.2222
p.R155Q
DO43891
UCEC
ICGC
LEIYNE
LIG_APCC_ABBA_1
0.2222
p.R155Q
SIDM00150
Colorectal Carcinoma
GDSC
LEIYNE
LIG_APCC_ABBA_1
0.2222
p.R155Q
ACH-000969
Colon/Colorectal Cancer
CCLE
LEIYNE
LIG_APCC_ABBA_1
0.2222
p.R172W
SIDM01113
Other Sarcomas
GDSC
LEIYNE
LIG_APCC_ABBA_1
0.1111
p.R172W
ACH-000939
Sarcoma
CCLE
LEIYNE
LIG_APCC_ABBA_1
0.1111
p.R172W
SK-UT-1
soft_tissue
COSMIC
LEIYNE
LIG_APCC_ABBA_1
0.1111
p.R172Q
SIDM00819
Kidney Carcinoma
GDSC
LEIYNE
LIG_APCC_ABBA_1
0.1111
p.R172Q
RCC-FG2
kidney
COSMIC
LEIYNE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with KIF12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEIYNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2VIQ3
Chromosome-associated kinesin KIF4B
LIG_APCC_ABBA_1
141:146
LEIYNE
APC,CDC20,FZR1
0.6253
More...
Q96L93
Kinesin-like protein KIF16B
LIG_APCC_ABBA_1
151:156
LEIYNE
APC,CDC20,FZR1
0.7637
More...
Q96FN5
Kinesin-like protein KIF12
LIG_APCC_ABBA_1
159:164
LEIYNE
APC,CDC20,FZR1
0.5147
More...