DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LKENR
Uniprot ID:
Q8NA47
Source protein:
Coiled-coil domain-containing protein 63
Source gene:
CCDC63
Class:
DEG_APCC_KENBOX_2
Location:
535:539
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5383
ASA_SCORE:
116.2
COIL:
0.5984
CONS_SCORE:
0.2443
DSS_SCORE:
0.3264
HELIX:
0.3824
FCONS_SCORE:
0.6792
RIG_SCORE:
0.7671
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G545R
TCGA-17-Z055
LUAD
TCGA
LKENR
DEG_APCC_KENBOX_2
0.1667
p.G545R
SIDM00850
Gastric Carcinoma
GDSC
LKENR
DEG_APCC_KENBOX_2
0.1667
p.G545R
AGS
stomach
COSMIC
LKENR
DEG_APCC_KENBOX_2
0.1667
p.R544C
TCGA-19-1787
GBM
TCGA
LKENR
DEG_APCC_KENBOX_2
0.1944
p.P549S
TCGA-44-5644
LUAD
TCGA
LKENR
DEG_APCC_KENBOX_2
0.0556
p.P549S
DO25153
LUAD
ICGC
LKENR
DEG_APCC_KENBOX_2
0.0556
p.E542G
TCGA-A5-A1OF
UCEC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.25
p.R539Q
TCGA-AA-3845
COAD
TCGA
LKENR
DEG_APCC_KENBOX_2
0.6218
p.S547G
TCGA-BA-4077
HNSC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.1111
p.S547G
DO15647
HNSC
ICGC
LKENR
DEG_APCC_KENBOX_2
0.1111
p.V543M
TCGA-DD-AAVV
LIHC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.2222
p.D531N
TCGA-EI-6917
READ
TCGA
LKENR
DEG_APCC_KENBOX_2
0.2222
p.D531N
TCGA-EO-A22R
UCEC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.2222
p.E542A
TCGA-EO-A3AV
UCEC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.25
p.S540I
DO228976
LICA
ICGC
LKENR
DEG_APCC_KENBOX_2
0.3056
p.Y533H
SIDM01608
Endometrial Carcinoma
GDSC
LKENR
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with CCDC63 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96MY7
Protein FAM161B
DEG_APCC_KENBOX_2
518:522
LKENR
APC,CDC20,FZR1
0.9635
More...
Q9BUG6
Zinc finger and SCAN domain-containing protein 5A
DEG_APCC_KENBOX_2
225:229
LKENR
APC,CDC20,FZR1
0.5671
More...
Q8NA47
Coiled-coil domain-containing protein 63
DEG_APCC_KENBOX_2
535:539
LKENR
APC,CDC20,FZR1
0.5383
More...