DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LKENR
Uniprot ID:
Q9BUG6
Source protein:
Zinc finger and SCAN domain-containing protein 5A
Source gene:
ZSCAN5A
Class:
DEG_APCC_KENBOX_2
Location:
225:229
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5671
ASA_SCORE:
110.86
COIL:
0.698
CONS_SCORE:
0.4171
DSS_SCORE:
0.7415
HELIX:
0.136
FCONS_SCORE:
0.7459
RIG_SCORE:
0.662
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E227K
TCGA-22-1000
LUSC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.7022
p.E227K
TCGA-EE-A181
SKCM
TCGA
LKENR
DEG_APCC_KENBOX_2
0.7022
p.E227K
DO27060
LUSC
ICGC
LKENR
DEG_APCC_KENBOX_2
0.7022
p.E227K
DO37444
SKCM
ICGC
LKENR
DEG_APCC_KENBOX_2
0.7022
p.R216K
TCGA-22-1000
LUSC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.0833
p.R216K
DO27060
LUSC
ICGC
LKENR
DEG_APCC_KENBOX_2
0.0833
p.E230K
TCGA-A2-A0EV
BRCA
TCGA
LKENR
DEG_APCC_KENBOX_2
0.3056
p.E230K
DO4942
BRCA
ICGC
LKENR
DEG_APCC_KENBOX_2
0.3056
p.E227V
TCGA-EE-A181
SKCM
TCGA
LKENR
DEG_APCC_KENBOX_2
0.7693
p.T236S
TCGA-F7-A622
HNSC
TCGA
LKENR
DEG_APCC_KENBOX_2
0.1389
p.T236S
DO49039
HNSC
ICGC
LKENR
DEG_APCC_KENBOX_2
0.1389
p.P217L
TCGA-VQ-A8P2
STAD
TCGA
LKENR
DEG_APCC_KENBOX_2
0.1111
p.P217L
DO51761
STAD
ICGC
LKENR
DEG_APCC_KENBOX_2
0.1111
p.I216V
DO6299
CESC
ICGC
LKENR
DEG_APCC_KENBOX_2
0.0833
p.P217T
DO228986
LICA
ICGC
LKENR
DEG_APCC_KENBOX_2
0.1111
p.P228L
DO42416
UCEC
ICGC
LKENR
DEG_APCC_KENBOX_2
0.7582
p.K218Q
SIDM01307
Colorectal Carcinoma
GDSC
LKENR
DEG_APCC_KENBOX_2
0.25
p.E231D
SIDM01218
Other Solid Cancers
GDSC
LKENR
DEG_APCC_KENBOX_2
0.2778
p.E231D
ACH-001530
Endometrial/Uterine Cancer
CCLE
LKENR
DEG_APCC_KENBOX_2
0.2778
p.E231D
JEG-3
placenta
COSMIC
LKENR
DEG_APCC_KENBOX_2
0.2778
p.P233L
SIDM01060
Melanoma
GDSC
LKENR
DEG_APCC_KENBOX_2
0.2222
p.P233L
ACH-000882
Skin Cancer
CCLE
LKENR
DEG_APCC_KENBOX_2
0.2222
p.P233L
IGR-1
skin
COSMIC
LKENR
DEG_APCC_KENBOX_2
0.2222
p.D224Y
SIDM00814
Other Solid Cancers
GDSC
LKENR
DEG_APCC_KENBOX_2
0.3056
p.D224Y
ACH-001401
Adrenal Cancer
CCLE
LKENR
DEG_APCC_KENBOX_2
0.3056
p.D224Y
SW13
adrenal_gland
COSMIC
LKENR
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with ZSCAN5A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96MY7
Protein FAM161B
DEG_APCC_KENBOX_2
518:522
LKENR
APC,CDC20,FZR1
0.9635
More...
Q9BUG6
Zinc finger and SCAN domain-containing protein 5A
DEG_APCC_KENBOX_2
225:229
LKENR
APC,CDC20,FZR1
0.5671
More...
Q8NA47
Coiled-coil domain-containing protein 63
DEG_APCC_KENBOX_2
535:539
LKENR
APC,CDC20,FZR1
0.5383
More...