DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENV
Uniprot ID:
P22888
Source protein:
Lutropin-choriogonadotropic hormone receptor
Source gene:
LHCGR
Class:
DEG_APCC_KENBOX_2
Location:
204:208
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9886
ASA_SCORE:
79.6
COIL:
0.745
CONS_SCORE:
0.4287
DSS_SCORE:
0.3926
HELIX:
0.1468
FCONS_SCORE:
0.8382
RIG_SCORE:
0.8111
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E203K
TCGA-18-3409
LUSC
TCGA
LKENV
DEG_APCC_KENBOX_2
0.3056
p.E203K
DO26444
LUSC
ICGC
LKENV
DEG_APCC_KENBOX_2
0.3056
p.N215H
TCGA-34-2609
LUSC
TCGA
LKENV
DEG_APCC_KENBOX_2
0.1389
p.N215H
DO26981
LUSC
ICGC
LKENV
DEG_APCC_KENBOX_2
0.1389
p.N195H
TCGA-44-2656
LUAD
TCGA
LKENV
DEG_APCC_KENBOX_2
0.0833
p.N195H
DO26052
LUAD
ICGC
LKENV
DEG_APCC_KENBOX_2
0.0833
p.F218Y
TCGA-4Z-AA7W
BLCA
TCGA
LKENV
DEG_APCC_KENBOX_2
0.0556
p.F218Y
DO218984
BLCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.0556
p.A217V
TCGA-A5-A0G2
UCEC
TCGA
LKENV
DEG_APCC_KENBOX_2
0.0833
p.A217V
DO41235
UCEC
ICGC
LKENV
DEG_APCC_KENBOX_2
0.0833
p.L204R
TCGA-AX-A0J0
UCEC
TCGA
LKENV
DEG_APCC_KENBOX_2
0.7316
p.L204R
DO41133
UCEC
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7316
p.T197M
TCGA-CG-5726
STAD
TCGA
LKENV
DEG_APCC_KENBOX_2
0.1389
p.T197M
DO38483
STAD
ICGC
LKENV
DEG_APCC_KENBOX_2
0.1389
p.E206D
TCGA-E6-A1LX
UCEC
TCGA
LKENV
DEG_APCC_KENBOX_2
0.6758
p.E206D
DO41020
UCEC
ICGC
LKENV
DEG_APCC_KENBOX_2
0.6758
p.E206K
TCGA-EE-A183
SKCM
TCGA
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
TCGA-EE-A20C
SKCM
TCGA
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
TCGA-EE-A2GC
SKCM
TCGA
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
TCGA-EE-A2GI
SKCM
TCGA
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
TCGA-WE-A8ZO
SKCM
TCGA
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO222775
MELA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO222837
MELA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO218912
SKCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO37839
SKCM
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO37715
SKCM
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO37410
SKCM
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO47665
SKCM
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
DO51286
SKCM
ICGC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
SIDM01175
Other Sarcomas
GDSC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
SIDM01000
Melanoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
ACH-000304
Skin Cancer
CCLE
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
ACH-002309
Sarcoma
CCLE
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
WM-115
skin
COSMIC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.E206K
SW684
soft_tissue
COSMIC
LKENV
DEG_APCC_KENBOX_2
0.7022
p.V208I
TCGA-EK-A2PK
CESC
TCGA
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V208I
DO48977
CESC
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V208I
DO49096
PACA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V208I
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V208I
SIDM00863
Burkitt's Lymphoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.L202M
DO229038
LICA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.2778
p.F194L
DO229041
LICA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.0556
p.F194L
SIDM01588
Endometrial Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.0556
p.F194L
ACH-000993
Endometrial/Uterine Cancer
CCLE
LKENV
DEG_APCC_KENBOX_2
0.0556
p.S201L
DO222494
MELA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.25
p.H214R
SIDM00364
B-Lymphoblastic Leukemia
GDSC
LKENV
DEG_APCC_KENBOX_2
0.1667
p.H214R
ACH-002059
Leukemia
CCLE
LKENV
DEG_APCC_KENBOX_2
0.1667
p.G196E
SIDM00282
Colorectal Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.1111
p.G196E
ACH-000998
Colon/Colorectal Cancer
CCLE
LKENV
DEG_APCC_KENBOX_2
0.1111
p.G196E
CW-2
large_intestine
COSMIC
LKENV
DEG_APCC_KENBOX_2
0.1111
p.F218L
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.0556
p.F218L
ACH-000929
Lung Cancer
CCLE
LKENV
DEG_APCC_KENBOX_2
0.0556
p.F218L
NCI-H2110
lung
COSMIC
LKENV
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with LHCGR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22888
Lutropin-choriogonadotropic hormone receptor
DEG_APCC_KENBOX_2
204:208
LKENV
APC,CDC20,FZR1
0.9886
More...
Q96BD8
Spindle and kinetochore-associated protein 1
DEG_APCC_KENBOX_2
87:91
LKENV
APC,CDC20,FZR1
0.5869
More...
Q9H4I2
Zinc fingers and homeoboxes protein 3
DEG_APCC_KENBOX_2
202:206
LKENV
APC,CDC20,FZR1
0.5352
More...