DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENV
Uniprot ID:
Q96BD8
Source protein:
Spindle and kinetochore-associated protein 1
Source gene:
SKA1
Class:
DEG_APCC_KENBOX_2
Location:
87:91
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5869
ASA_SCORE:
73.64
COIL:
0.4124
CONS_SCORE:
0.4209
DSS_SCORE:
0.4723
HELIX:
0.5684
FCONS_SCORE:
1.1314
RIG_SCORE:
0.7059
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D83Y
TCGA-64-5778
LUAD
TCGA
LKENV
DEG_APCC_KENBOX_2
0.2222
p.D83Y
TCGA-EI-6917
READ
TCGA
LKENV
DEG_APCC_KENBOX_2
0.2222
p.D83Y
DO25837
LUAD
ICGC
LKENV
DEG_APCC_KENBOX_2
0.2222
p.D83Y
DO36881
READ
ICGC
LKENV
DEG_APCC_KENBOX_2
0.2222
p.V91I
DO229010
COCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V91I
DO229013
COCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V91I
DO229016
COCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V91I
DO229003
COCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.V91I
DO229005
COCA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.5965
p.Y81N
DO233297
NACA
ICGC
LKENV
DEG_APCC_KENBOX_2
0.1667
p.I84T
SIDM01045
Endometrial Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.25
p.I84T
ACH-000978
Endometrial/Uterine Cancer
CCLE
LKENV
DEG_APCC_KENBOX_2
0.25
p.I84T
EN
endometrium
COSMIC
LKENV
DEG_APCC_KENBOX_2
0.25
p.H86R
SIDM00721
Small Cell Lung Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.3056
p.D80Y
SIDM01611
Endometrial Carcinoma
GDSC
LKENV
DEG_APCC_KENBOX_2
0.1389
p.D80Y
ACH-000996
Endometrial/Uterine Cancer
CCLE
LKENV
DEG_APCC_KENBOX_2
0.1389
p.R100C
SNU-1040
large_intestine
COSMIC
LKENV
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with SKA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22888
Lutropin-choriogonadotropic hormone receptor
DEG_APCC_KENBOX_2
204:208
LKENV
APC,CDC20,FZR1
0.9886
More...
Q96BD8
Spindle and kinetochore-associated protein 1
DEG_APCC_KENBOX_2
87:91
LKENV
APC,CDC20,FZR1
0.5869
More...
Q9H4I2
Zinc fingers and homeoboxes protein 3
DEG_APCC_KENBOX_2
202:206
LKENV
APC,CDC20,FZR1
0.5352
More...