DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPEST
Uniprot ID:
Q9H3T2
Source protein:
Semaphorin-6C
Source gene:
SEMA6C
Class:
DEG_SCF_FBW7_1
Location:
698:704
E3 ligase:
FBXW7
DEGRON score:
0.9984
ASA_SCORE:
72.7714
COIL:
0.939
CONS_SCORE:
0.367
DSS_SCORE:
0.6046
HELIX:
0.0299
FCONS_SCORE:
1.0216
RIG_SCORE:
0.67
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R688Q
TCGA-DD-AADK
LIHC
TCGA
LPTPEST
DEG_SCF_FBW7_1
0.0556
p.R713L
DO12586
GBM
ICGC
LPTPEST
DEG_SCF_FBW7_1
0.0833
p.P708S
DO229211
THCA
ICGC
LPTPEST
DEG_SCF_FBW7_1
0.2222
p.P696L
SIDM01721
Non-Cancerous
GDSC
LPTPEST
DEG_SCF_FBW7_1
0.2778
p.H711R
ACH-000937
Leukemia
CCLE
LPTPEST
DEG_SCF_FBW7_1
0.1389
p.A696V
ACH-000983
Leukemia
CCLE
LPTPEST
DEG_SCF_FBW7_1
0.2778
p.R713H
ACH-000984
Endometrial/Uterine Cancer
CCLE
LPTPEST
DEG_SCF_FBW7_1
0.0833
p.P692L
ACH-001605
Brain Cancer
CCLE
LPTPEST
DEG_SCF_FBW7_1
0.1667
Drug responses associated with SEMA6C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPEST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFY4
Semaphorin-6D
DEG_SCF_FBW7_1
771:777
LPTPEST
FBXW7
0.9976
More...
Q9H2E6
Semaphorin-6A
DEG_SCF_FBW7_1
755:761
LPTPEST
FBXW7
0.9956
More...
Q9H3T2
Semaphorin-6C
DEG_SCF_FBW7_1
698:704
LPTPEST
FBXW7
0.9984
More...