DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVSLEEIY
Uniprot ID:
O75953
Source protein:
DnaJ homolog subfamily B member 5
Source gene:
DNAJB5
Class:
DEG_APCC_DBOX_1
Location:
175:183
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6928
ASA_SCORE:
75.8333
COIL:
0.4304
CONS_SCORE:
0.6387
DSS_SCORE:
0.3968
HELIX:
0.2122
FCONS_SCORE:
1.2772
RIG_SCORE:
0.7776
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E183K
TCGA-AA-A01T
COAD
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.7022
p.G189S
TCGA-AG-3742
READ
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.1667
p.L186P
TCGA-AP-A1DK
UCEC
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.25
p.E183Q
TCGA-CG-4437
STAD
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.6744
p.G189R
TCGA-EB-A3Y7
SKCM
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.1667
p.E169D
DO227976
COCA
ICGC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1667
p.R176L
DO229008
LICA
ICGC
LRVSLEEIY
DEG_APCC_DBOX_1
0.8428
p.G190S
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1389
p.G190S
SIDM01263
T-Lymphoblastic Leukemia
GDSC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1389
p.G190S
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1389
p.S170I
SIDM00980
Gastric Carcinoma
GDSC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1944
p.S170I
23132-87
stomach
COSMIC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1944
p.S177P
MFE-319
endometrium
COSMIC
LRVSLEEIY
DEG_APCC_DBOX_1
0.6752
Drug responses associated with DNAJB5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVSLEEIY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25685
DnaJ homolog subfamily B member 1
DEG_APCC_DBOX_1
168:176
LRVSLEEIY
APC,CDC20,FZR1
0.9784
More...
Q9UDY4
DnaJ homolog subfamily B member 4
DEG_APCC_DBOX_1
164:172
LRVSLEEIY
APC,CDC20,FZR1
0.5098
More...
O75953
DnaJ homolog subfamily B member 5
DEG_APCC_DBOX_1
175:183
LRVSLEEIY
APC,CDC20,FZR1
0.6928
More...