DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVSLEEIY
Uniprot ID:
Q9UDY4
Source protein:
DnaJ homolog subfamily B member 4
Source gene:
DNAJB4
Class:
DEG_APCC_DBOX_1
Location:
164:172
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5098
ASA_SCORE:
53.7667
COIL:
0.2478
CONS_SCORE:
0.6613
DSS_SCORE:
0.3044
HELIX:
0.3646
FCONS_SCORE:
1.2708
RIG_SCORE:
0.8206
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S182Y
TCGA-ND-A4WC
UCS
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.0556
p.S167L
TCGA-P3-A5QF
HNSC
TCGA
LRVSLEEIY
DEG_APCC_DBOX_1
0.7667
p.S167L
DO44439
HNSC
ICGC
LRVSLEEIY
DEG_APCC_DBOX_1
0.7667
p.R178W
DO220823
BRCA
ICGC
LRVSLEEIY
DEG_APCC_DBOX_1
0.1667
p.I161S
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
LRVSLEEIY
DEG_APCC_DBOX_1
0.25
p.I161S
ACH-000647
Esophageal Cancer
CCLE
LRVSLEEIY
DEG_APCC_DBOX_1
0.25
p.I161S
TE-1
oesophagus
COSMIC
LRVSLEEIY
DEG_APCC_DBOX_1
0.25
p.R178L
ACH-001645
Skin Cancer
CCLE
LRVSLEEIY
DEG_APCC_DBOX_1
0.1667
Drug responses associated with DNAJB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVSLEEIY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25685
DnaJ homolog subfamily B member 1
DEG_APCC_DBOX_1
168:176
LRVSLEEIY
APC,CDC20,FZR1
0.9784
More...
Q9UDY4
DnaJ homolog subfamily B member 4
DEG_APCC_DBOX_1
164:172
LRVSLEEIY
APC,CDC20,FZR1
0.5098
More...
O75953
DnaJ homolog subfamily B member 5
DEG_APCC_DBOX_1
175:183
LRVSLEEIY
APC,CDC20,FZR1
0.6928
More...