DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTITPEPT
Uniprot ID:
O60309
Source protein:
Leucine-rich repeat-containing protein 37A3
Source gene:
LRRC37A3
Class:
DEG_SCF_FBW7_1
Location:
615:622
E3 ligase:
FBXW7
DEGRON score:
0.9004
ASA_SCORE:
92.75
COIL:
0.9584
CONS_SCORE:
0.6041
DSS_SCORE:
0.5952
HELIX:
0.0165
FCONS_SCORE:
0.964
RIG_SCORE:
0.7013
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N605Y
DO228924
LICA
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.0556
p.A613S
DO228946
LICA
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.2778
p.A613S
DO228950
LICA
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.2778
p.A613S
DO229030
LICA
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.2778
p.A613S
DO229057
LICA
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.2778
p.P619Q
DO23540
LIRI
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.7035
p.N607I
DO228633
PRAD
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.1111
p.R609I
DO36556
READ
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.1667
p.L611F
DO37406
SKCM
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.2222
p.R617Q
DO41584
UCEC
ICGC
LTITPEPT
DEG_SCF_FBW7_1
0.7329
p.E624D
SIDM01314
Colorectal Carcinoma
GDSC
LTITPEPT
DEG_SCF_FBW7_1
0.2778
p.A623V
SNU-175
large_intestine
COSMIC
LTITPEPT
DEG_SCF_FBW7_1
0.3056
p.G625E
H2595
pleura
COSMIC
LTITPEPT
DEG_SCF_FBW7_1
0.25
p.C632Y
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
LTITPEPT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with LRRC37A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTITPEPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NM11
Leucine-rich repeat-containing protein 37A2
DEG_SCF_FBW7_1
615:622
LTITPEPT
FBXW7
0.8835
More...
A6NMS7
Leucine-rich repeat-containing protein 37A
DEG_SCF_FBW7_1
615:622
LTITPEPT
FBXW7
0.8835
More...
O60309
Leucine-rich repeat-containing protein 37A3
DEG_SCF_FBW7_1
615:622
LTITPEPT
FBXW7
0.9004
More...