DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPASS
Uniprot ID:
Q9UKN1
Source protein:
Mucin-12
Source gene:
MUC12
Class:
DEG_SCF_FBW7_1
Location:
4206:4211
E3 ligase:
FBXW7
DEGRON score:
0.6169
ASA_SCORE:
84.5
COIL:
0.8867
CONS_SCORE:
0
DSS_SCORE:
0.6399
HELIX:
0.0197
FCONS_SCORE:
0
RIG_SCORE:
0.668
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T4214A
DO229348
LAML
ICGC
LTPASS
DEG_SCF_FBW7_1
0.25
p.T4214A
DO228974
LICA
ICGC
LTPASS
DEG_SCF_FBW7_1
0.25
p.P4198L
SIDM00857
Melanoma
GDSC
LTPASS
DEG_SCF_FBW7_1
0.1111
p.P4198L
G-361
skin
COSMIC
LTPASS
DEG_SCF_FBW7_1
0.1111
p.R4196S
SIDM00353
Other Sarcomas
GDSC
LTPASS
DEG_SCF_FBW7_1
0.0556
p.R4196S
RKN
ovary
COSMIC
LTPASS
DEG_SCF_FBW7_1
0.0556
p.G4215A
IGR-37
skin
COSMIC
LTPASS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with MUC12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPASS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UKN1
Mucin-12
DEG_SCF_FBW7_1
1566:1571
LTPASS
FBXW7
0.6595
More...
Q9UKN1
Mucin-12
DEG_SCF_FBW7_1
3123:3128
LTPASS
FBXW7
0.8291
More...
Q9UKN1
Mucin-12
DEG_SCF_FBW7_1
4206:4211
LTPASS
FBXW7
0.6169
More...
Q9UM11
Fizzy-related protein homolog
DEG_SCF_FBW7_1
31:36
LTPASS
FBXW7
0.9905
More...