DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPESS
Uniprot ID:
Q8TDC3
Source protein:
Serine/threonine-protein kinase BRSK1
Source gene:
BRSK1
Class:
DEG_SCF_FBW7_1
Location:
582:587
E3 ligase:
FBXW7
DEGRON score:
0.9475
ASA_SCORE:
84.8667
COIL:
0.9307
CONS_SCORE:
0.454
DSS_SCORE:
0.5192
HELIX:
0.0493
FCONS_SCORE:
0.9888
RIG_SCORE:
0.6626
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A576T
TCGA-43-A475
LUSC
TCGA
LTPESS
DEG_SCF_FBW7_1
0.1667
p.A576T
TCGA-DK-A6AW
BLCA
TCGA
LTPESS
DEG_SCF_FBW7_1
0.1667
p.A576T
TCGA-EA-A3HS
CESC
TCGA
LTPESS
DEG_SCF_FBW7_1
0.1667
p.Q572H
TCGA-95-7947
LUAD
TCGA
LTPESS
DEG_SCF_FBW7_1
0.0556
p.P588S
TCGA-AP-A1DK
UCEC
TCGA
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588S
SIDM00545
Melanoma
GDSC
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588S
SIDM01175
Other Sarcomas
GDSC
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588S
Mewo
skin
COSMIC
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588S
SW684
soft_tissue
COSMIC
LTPESS
DEG_SCF_FBW7_1
0.3056
p.G597E
TCGA-CV-A468
HNSC
TCGA
LTPESS
DEG_SCF_FBW7_1
0.0556
p.P588Q
TCGA-D3-A2JC
SKCM
TCGA
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588Q
SIDM00986
Head and Neck Carcinoma
GDSC
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588Q
BHY
upper_aerodigestive_tract
COSMIC
LTPESS
DEG_SCF_FBW7_1
0.3056
p.P588T
TCGA-DA-A1I5
SKCM
TCGA
LTPESS
DEG_SCF_FBW7_1
0.3056
p.E585K
TCGA-EE-A2A2
SKCM
TCGA
LTPESS
DEG_SCF_FBW7_1
0.591
p.F576L
Becker
central_nervous_system
COSMIC
LTPESS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with BRSK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPESS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SWA1
Protein phosphatase 1 regulatory subunit 15B
DEG_SCF_FBW7_1
253:258
LTPESS
FBXW7
0.9912
More...
Q8IWQ3
Serine/threonine-protein kinase BRSK2
DEG_SCF_FBW7_1
508:513
LTPESS
FBXW7
0.9621
More...
Q8TDC3
Serine/threonine-protein kinase BRSK1
DEG_SCF_FBW7_1
582:587
LTPESS
FBXW7
0.9475
More...