DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPYRD
Uniprot ID:
Q92558
Source protein:
Wiskott-Aldrich syndrome protein family member 1
Source gene:
WASF1
Class:
LIG_APCC_ABBA_1
Location:
137:142
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.992
ASA_SCORE:
56.3667
COIL:
0.7608
CONS_SCORE:
0.7337
DSS_SCORE:
0.4562
HELIX:
0.0338
FCONS_SCORE:
0.9895
RIG_SCORE:
0.8056
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G144C
TCGA-F1-6177
STAD
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.2778
p.G144C
DO38727
STAD
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.2778
p.L137F
TCGA-FS-A1ZF
SKCM
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.587
p.L137F
DO38039
SKCM
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.587
p.Y140N
DO222729
COCA
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.7059
p.Y140C
SIDM00193
Colorectal Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.7087
p.Y140C
ACH-000991
Colon/Colorectal Cancer
CCLE
LTPYRD
LIG_APCC_ABBA_1
0.7087
p.Y140C
SNU-81
large_intestine
COSMIC
LTPYRD
LIG_APCC_ABBA_1
0.7087
p.K145E
SIDM01045
Endometrial Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.3611
p.K145E
ACH-000978
Endometrial/Uterine Cancer
CCLE
LTPYRD
LIG_APCC_ABBA_1
0.3611
p.K145E
EN
endometrium
COSMIC
LTPYRD
LIG_APCC_ABBA_1
0.3611
p.Y151H
SIDM01608
Endometrial Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.0833
p.Y151H
ACH-000990
Endometrial/Uterine Cancer
CCLE
LTPYRD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with WASF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92558
Wiskott-Aldrich syndrome protein family member 1
LIG_APCC_ABBA_1
137:142
LTPYRD
APC,CDC20,FZR1
0.992
More...
Q9UPY6
Wiskott-Aldrich syndrome protein family member 3
LIG_APCC_ABBA_1
137:142
LTPYRD
APC,CDC20,FZR1
0.9911
More...
Q9Y6W5
Wiskott-Aldrich syndrome protein family member 2
LIG_APCC_ABBA_1
136:141
LTPYRD
APC,CDC20,FZR1
0.9975
More...