DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPYRD
Uniprot ID:
Q9Y6W5
Source protein:
Wiskott-Aldrich syndrome protein family member 2
Source gene:
WASF2
Class:
LIG_APCC_ABBA_1
Location:
136:141
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9975
ASA_SCORE:
64.0833
COIL:
0.8023
CONS_SCORE:
0.709
DSS_SCORE:
0.4763
HELIX:
0.0858
FCONS_SCORE:
0.9753
RIG_SCORE:
0.7835
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P131S
TCGA-A5-A0G2
UCEC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.1944
p.P131S
DO41235
UCEC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.1944
p.L147F
TCGA-B5-A11E
UCEC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.1667
p.L147F
DO41644
UCEC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.1667
p.P130S
TCGA-BT-A20J
BLCA
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.1667
p.P130S
DO457
BLCA
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.1667
p.L133I
TCGA-CQ-5333
HNSC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.25
p.L133I
DO14218
HNSC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.25
p.Y150C
TCGA-D1-A103
UCEC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.5278
p.Y150C
DO42312
UCEC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.5278
p.L136V
TCGA-DR-A0ZM
CESC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.5654
p.L136V
DO6254
CESC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.5654
p.T151K
DO228952
LICA
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.0556
p.K148R
SIDM00238
Ovarian Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.25
p.K148R
SIDM00368
Small Cell Lung Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.25
p.K148R
SIDM01570
Ovarian Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.25
p.K148R
OVK-18
ovary
COSMIC
LTPYRD
LIG_APCC_ABBA_1
0.25
p.K148R
SBC-5
lung
COSMIC
LTPYRD
LIG_APCC_ABBA_1
0.25
Drug responses associated with WASF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92558
Wiskott-Aldrich syndrome protein family member 1
LIG_APCC_ABBA_1
137:142
LTPYRD
APC,CDC20,FZR1
0.992
More...
Q9UPY6
Wiskott-Aldrich syndrome protein family member 3
LIG_APCC_ABBA_1
137:142
LTPYRD
APC,CDC20,FZR1
0.9911
More...
Q9Y6W5
Wiskott-Aldrich syndrome protein family member 2
LIG_APCC_ABBA_1
136:141
LTPYRD
APC,CDC20,FZR1
0.9975
More...