DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPYRD
Uniprot ID:
Q9UPY6
Source protein:
Wiskott-Aldrich syndrome protein family member 3
Source gene:
WASF3
Class:
LIG_APCC_ABBA_1
Location:
137:142
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9911
ASA_SCORE:
79
COIL:
0.8257
CONS_SCORE:
0.7428
DSS_SCORE:
0.4798
HELIX:
0.1015
FCONS_SCORE:
0.9689
RIG_SCORE:
0.7929
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D143G
TCGA-DI-A0WH
UCEC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.3056
p.D143G
DO43843
UCEC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.3056
p.F150L
TCGA-EO-A3B0
UCEC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.1111
p.F150L
DO219773
UCEC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.1111
p.Q127H
TCGA-T2-A6X2
HNSC
TCGA
LTPYRD
LIG_APCC_ABBA_1
0.0556
p.Q127H
DO219071
HNSC
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.0556
p.Y151C
DO48411
BLCA
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.5278
p.K130T
DO233703
GACA
ICGC
LTPYRD
LIG_APCC_ABBA_1
0.25
p.P133T
SIDM00723
Non-Small Cell Lung Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.2222
p.P133T
SIDM01749
Osteosarcoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.2222
p.P133T
NCI-H2444
lung
COSMIC
LTPYRD
LIG_APCC_ABBA_1
0.2222
p.S128G
SIDM00282
Colorectal Carcinoma
GDSC
LTPYRD
LIG_APCC_ABBA_1
0.0833
p.S128G
ACH-000998
Colon/Colorectal Cancer
CCLE
LTPYRD
LIG_APCC_ABBA_1
0.0833
p.S128G
CW-2
large_intestine
COSMIC
LTPYRD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with WASF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92558
Wiskott-Aldrich syndrome protein family member 1
LIG_APCC_ABBA_1
137:142
LTPYRD
APC,CDC20,FZR1
0.992
More...
Q9UPY6
Wiskott-Aldrich syndrome protein family member 3
LIG_APCC_ABBA_1
137:142
LTPYRD
APC,CDC20,FZR1
0.9911
More...
Q9Y6W5
Wiskott-Aldrich syndrome protein family member 2
LIG_APCC_ABBA_1
136:141
LTPYRD
APC,CDC20,FZR1
0.9975
More...