DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVPFLD
Uniprot ID:
O60309
Source protein:
Leucine-rich repeat-containing protein 37A3
Source gene:
LRRC37A3
Class:
LIG_APCC_ABBA_1
Location:
106:111
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7588
ASA_SCORE:
83.5167
COIL:
0.9023
CONS_SCORE:
0.4121
DSS_SCORE:
0.6202
HELIX:
0.0577
FCONS_SCORE:
0.9839
RIG_SCORE:
0.7674
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E101K
TCGA-06-5416
GBM
TCGA
LVPFLD
LIG_APCC_ABBA_1
0.1944
p.E101K
DO10880
GBM
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.1944
p.E101K
SW684
soft_tissue
COSMIC
LVPFLD
LIG_APCC_ABBA_1
0.1944
p.A97V
TCGA-2W-A8YY
CESC
TCGA
LVPFLD
LIG_APCC_ABBA_1
0.0833
p.A97V
DO223732
CESC
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.0833
p.L102V
DO569
BLCA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.2222
p.T116M
DO9708
COAD
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.1944
p.L108F
DO228945
LICA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.6981
p.P106S
DO228945
LICA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.6752
p.L117Q
DO228946
LICA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.1667
p.L117Q
DO229057
LICA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.1667
p.D99Y
DO229045
LICA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.1389
p.V118A
DO229047
LICA
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.1389
p.K109N
DO219773
UCEC
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.6918
p.T121I
DO42328
UCEC
ICGC
LVPFLD
LIG_APCC_ABBA_1
0.0556
p.R115Q
COLO-824
breast
COSMIC
LVPFLD
LIG_APCC_ABBA_1
0.2222
p.N108K
MCF7
breast
COSMIC
LVPFLD
LIG_APCC_ABBA_1
0.6918
p.A107V
MDA-MB-453
breast
COSMIC
LVPFLD
LIG_APCC_ABBA_1
0.6936
p.A106V
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
LVPFLD
LIG_APCC_ABBA_1
0.6936
p.E105K
MDA-MB-361
breast
COSMIC
LVPFLD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with LRRC37A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVPFLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NM11
Leucine-rich repeat-containing protein 37A2
LIG_APCC_ABBA_1
106:111
LVPFLD
APC,CDC20,FZR1
0.9916
More...
A6NMS7
Leucine-rich repeat-containing protein 37A
LIG_APCC_ABBA_1
106:111
LVPFLD
APC,CDC20,FZR1
0.9907
More...
O60309
Leucine-rich repeat-containing protein 37A3
LIG_APCC_ABBA_1
106:111
LVPFLD
APC,CDC20,FZR1
0.7588
More...