DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PHSST
Uniprot ID:
Q6UXF1
Source protein:
Transmembrane protein 108
Source gene:
TMEM108
Class:
DEG_SPOP_SBC_1
Location:
54:58
E3 ligase:
SPOP
DEGRON score:
0.9327
ASA_SCORE:
94.14
COIL:
0.9494
CONS_SCORE:
0.3546
DSS_SCORE:
0.6656
HELIX:
0.0316
FCONS_SCORE:
0.9308
RIG_SCORE:
0.5998
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A53T
TCGA-AJ-A3EK
UCEC
TCGA
PHSST
DEG_SPOP_SBC_1
0.3056
p.A53T
DO41584
UCEC
ICGC
PHSST
DEG_SPOP_SBC_1
0.3056
p.S62Y
TCGA-BK-A6W3
UCEC
TCGA
PHSST
DEG_SPOP_SBC_1
0.2222
p.S62Y
DO50076
UCEC
ICGC
PHSST
DEG_SPOP_SBC_1
0.2222
p.H55Y
TCGA-E5-A4U1
BLCA
TCGA
PHSST
DEG_SPOP_SBC_1
0.6118
p.H55Y
DO44061
BLCA
ICGC
PHSST
DEG_SPOP_SBC_1
0.6118
p.E65Q
DO51866
BLCA
ICGC
PHSST
DEG_SPOP_SBC_1
0.1389
p.E65K
DO14566
HNSC
ICGC
PHSST
DEG_SPOP_SBC_1
0.1389
p.P54H
DO50966
LICA
ICGC
PHSST
DEG_SPOP_SBC_1
0.7694
Drug responses associated with TMEM108 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q68D10
Protein SPT2 homolog
DEG_SPOP_SBC_1
315:319
PHSST
SPOP
0.9783
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
54:58
PHSST
SPOP
0.9327
More...
Q9C0B9
Zinc finger CCHC domain-containing protein 2
DEG_SPOP_SBC_1
801:805
PHSST
SPOP
0.9964
More...