DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PHTTS
Uniprot ID:
Q7Z5N4
Source protein:
Protein sidekick-1
Source gene:
SDK1
Class:
DEG_SPOP_SBC_1
Location:
1589:1593
E3 ligase:
SPOP
DEGRON score:
0.8702
ASA_SCORE:
66.58
COIL:
0.6872
CONS_SCORE:
0.4886
DSS_SCORE:
0.5292
HELIX:
0.009
FCONS_SCORE:
0.8747
RIG_SCORE:
0.694
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1600H
TCGA-09-2044
OV
TCGA
PHTTS
DEG_SPOP_SBC_1
0.1389
p.Q1600H
DO229045
LICA
ICGC
PHTTS
DEG_SPOP_SBC_1
0.1389
p.Q1600H
DO28923
OV
ICGC
PHTTS
DEG_SPOP_SBC_1
0.1389
p.P1602Q
TCGA-BR-4362
STAD
TCGA
PHTTS
DEG_SPOP_SBC_1
0.0833
p.P1602Q
DO38336
STAD
ICGC
PHTTS
DEG_SPOP_SBC_1
0.0833
p.S1594F
TCGA-D3-A2JP
SKCM
TCGA
PHTTS
DEG_SPOP_SBC_1
0.3056
p.S1594F
DO47407
SKCM
ICGC
PHTTS
DEG_SPOP_SBC_1
0.3056
p.P1602L
TCGA-DC-6158
READ
TCGA
PHTTS
DEG_SPOP_SBC_1
0.0833
p.P1602L
DO37197
READ
ICGC
PHTTS
DEG_SPOP_SBC_1
0.0833
p.P1602L
SIDM01060
Melanoma
GDSC
PHTTS
DEG_SPOP_SBC_1
0.0833
p.P1602L
IGR-1
skin
COSMIC
PHTTS
DEG_SPOP_SBC_1
0.0833
p.E1580G
DO229229
THCA
ICGC
PHTTS
DEG_SPOP_SBC_1
0.0833
p.S1593F
SIDM00955
Melanoma
GDSC
PHTTS
DEG_SPOP_SBC_1
0.7982
p.S1593F
ACH-000812
Skin Cancer
CCLE
PHTTS
DEG_SPOP_SBC_1
0.7982
p.S1593F
COLO-783
skin
COSMIC
PHTTS
DEG_SPOP_SBC_1
0.7982
Drug responses associated with SDK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53TQ3
INO80 complex subunit D
DEG_SPOP_SBC_1
846:850
PHTTS
SPOP
0.9409
More...
Q7Z5N4
Protein sidekick-1
DEG_SPOP_SBC_1
1589:1593
PHTTS
SPOP
0.8702
More...
Q9H8J5
MANSC domain-containing protein 1
DEG_SPOP_SBC_1
235:239
PHTTS
SPOP
0.9619
More...