DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKENL
Uniprot ID:
Q13127
Source protein:
RE1-silencing transcription factor
Source gene:
REST
Class:
DEG_APCC_KENBOX_2
Location:
868:872
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7388
ASA_SCORE:
103.52
COIL:
0.7896
CONS_SCORE:
0.314
DSS_SCORE:
0.7588
HELIX:
0.1892
FCONS_SCORE:
0.7342
RIG_SCORE:
0.6393
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N871K
TCGA-DU-6392
LGG
TCGA
PKENL
DEG_APCC_KENBOX_2
0.6918
p.N871K
DO22237
LGG
ICGC
PKENL
DEG_APCC_KENBOX_2
0.6918
p.D859V
DO228080
EOPC
ICGC
PKENL
DEG_APCC_KENBOX_2
0.0833
p.E858A
DO233871
GACA
ICGC
PKENL
DEG_APCC_KENBOX_2
0.0556
p.K881I
DO231786
LINC
ICGC
PKENL
DEG_APCC_KENBOX_2
0.1944
p.L882I
SIDM01574
Plasma Cell Myeloma
GDSC
PKENL
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with REST mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94856
Neurofascin
DEG_APCC_KENBOX_2
143:147
PKENL
APC,CDC20,FZR1
0.9786
More...
Q13127
RE1-silencing transcription factor
DEG_APCC_KENBOX_2
868:872
PKENL
APC,CDC20,FZR1
0.7388
More...
Q99550
M-phase phosphoprotein 9
DEG_APCC_KENBOX_2
837:841
PKENL
APC,CDC20,FZR1
0.9987
More...
Q9BYD2
39S ribosomal protein L9, mitochondrial
DEG_APCC_KENBOX_2
90:94
PKENL
APC,CDC20,FZR1
0.9892
More...