DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPPAT
Uniprot ID:
Q96S42
Source protein:
Nodal homolog
Source gene:
NODAL
Class:
DEG_SCF_FBW7_1
Location:
184:190
E3 ligase:
FBXW7
DEGRON score:
0.7419
ASA_SCORE:
80.5143
COIL:
0.8854
CONS_SCORE:
0.3645
DSS_SCORE:
0.3509
HELIX:
0.052
FCONS_SCORE:
0.8797
RIG_SCORE:
0.7016
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P182L
TCGA-29-1711
OV
TCGA
PPTPPAT
DEG_SCF_FBW7_1
0.2778
p.P182L
DO30630
OV
ICGC
PPTPPAT
DEG_SCF_FBW7_1
0.2778
p.R175G
TCGA-2Y-A9H5
LIHC
TCGA
PPTPPAT
DEG_SCF_FBW7_1
0.0833
p.R175G
DO219529
LIHC
ICGC
PPTPPAT
DEG_SCF_FBW7_1
0.0833
p.R183Q
TCGA-AO-A128
BRCA
TCGA
PPTPPAT
DEG_SCF_FBW7_1
0.3056
p.R183Q
DO5326
BRCA
ICGC
PPTPPAT
DEG_SCF_FBW7_1
0.3056
p.P182S
TCGA-E6-A1M0
UCEC
TCGA
PPTPPAT
DEG_SCF_FBW7_1
0.2778
p.P182S
DO43682
UCEC
ICGC
PPTPPAT
DEG_SCF_FBW7_1
0.2778
p.R183W
TCGA-V5-AASX
ESCA
TCGA
PPTPPAT
DEG_SCF_FBW7_1
0.3056
p.P182T
DO25104
LUAD
ICGC
PPTPPAT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with NODAL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPPAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13202
Dual specificity protein phosphatase 8
DEG_SCF_FBW7_1
361:367
PPTPPAT
FBXW7
0.8872
More...
Q8TAX7
Mucin-7
DEG_SCF_FBW7_1
215:221
PPTPPAT
FBXW7
0.8801
More...
Q96S42
Nodal homolog
DEG_SCF_FBW7_1
184:190
PPTPPAT
FBXW7
0.7419
More...