DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPGSS
Uniprot ID:
P10636
Source protein:
Microtubule-associated protein tau
Source gene:
MAPT
Class:
DEG_SCF_FBW7_1
Location:
415:420
E3 ligase:
FBXW7
DEGRON score:
0.9661
ASA_SCORE:
86.5667
COIL:
0.9693
CONS_SCORE:
0.349
DSS_SCORE:
0.7121
HELIX:
0.012
FCONS_SCORE:
0.9153
RIG_SCORE:
0.5101
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A430S
TCGA-64-1676
LUAD
TCGA
PTPGSS
DEG_SCF_FBW7_1
0.0556
p.A430S
DO23629
LUAD
ICGC
PTPGSS
DEG_SCF_FBW7_1
0.0556
p.P415L
TCGA-D3-A5GO
SKCM
TCGA
PTPGSS
DEG_SCF_FBW7_1
0.6471
p.P415L
DO47419
SKCM
ICGC
PTPGSS
DEG_SCF_FBW7_1
0.6471
p.A430V
TCGA-EY-A1GQ
UCEC
TCGA
PTPGSS
DEG_SCF_FBW7_1
0.0556
p.A430V
DO43090
UCEC
ICGC
PTPGSS
DEG_SCF_FBW7_1
0.0556
p.S427F
DO218838
SKCA
ICGC
PTPGSS
DEG_SCF_FBW7_1
0.1389
p.S427F
SIDM00081
Melanoma
GDSC
PTPGSS
DEG_SCF_FBW7_1
0.1389
p.S427F
SIDM01220
Glioma
GDSC
PTPGSS
DEG_SCF_FBW7_1
0.1389
p.S427F
SIDM01504
Small Cell Lung Carcinoma
GDSC
PTPGSS
DEG_SCF_FBW7_1
0.1389
p.S427P
SIDM00333
Endometrial Carcinoma
GDSC
PTPGSS
DEG_SCF_FBW7_1
0.1389
p.L410F
SIDM00836
Colorectal Carcinoma
GDSC
PTPGSS
DEG_SCF_FBW7_1
0.1944
p.L410F
SW403
large_intestine
COSMIC
PTPGSS
DEG_SCF_FBW7_1
0.1944
p.K405R
SIDM01778
B-Cell Non-Hodgkin's Lymphoma
GDSC
PTPGSS
DEG_SCF_FBW7_1
0.1667
p.K405R
ACH-000158
Lymphoma
CCLE
PTPGSS
DEG_SCF_FBW7_1
0.1667
p.H407R
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
PTPGSS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with MAPT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPGSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10636
Microtubule-associated protein tau
DEG_SCF_FBW7_1
415:420
PTPGSS
FBXW7
0.9661
More...
Q8IX07
Zinc finger protein ZFPM1
DEG_SCF_FBW7_1
507:512
PTPGSS
FBXW7
0.9987
More...
Q8N2Y8
AP-4 complex accessory subunit RUSC2
DEG_SCF_FBW7_1
1509:1514
PTPGSS
FBXW7
0.7028
More...