DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPVTS
Uniprot ID:
Q7Z6Z7
Source protein:
E3 ubiquitin-protein ligase HUWE1
Source gene:
HUWE1
Class:
DEG_SCF_FBW7_1
Location:
3508:3513
E3 ligase:
FBXW7
DEGRON score:
0.7023
ASA_SCORE:
86.5
COIL:
0.896
CONS_SCORE:
0.3369
DSS_SCORE:
0.5286
HELIX:
0.0557
FCONS_SCORE:
0.964
RIG_SCORE:
0.7436
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A3516S
TCGA-05-4382
LUAD
TCGA
PTPVTS
DEG_SCF_FBW7_1
0.25
p.A3516S
DO24900
LUAD
ICGC
PTPVTS
DEG_SCF_FBW7_1
0.25
p.S3513F
TCGA-AP-A0LM
UCEC
TCGA
PTPVTS
DEG_SCF_FBW7_1
0.7982
p.S3513F
DO43306
UCEC
ICGC
PTPVTS
DEG_SCF_FBW7_1
0.7982
p.P3515T
TCGA-NA-A4R0
UCS
TCGA
PTPVTS
DEG_SCF_FBW7_1
0.2778
p.T3521A
TCGA-ZP-A9CY
LIHC
TCGA
PTPVTS
DEG_SCF_FBW7_1
0.1111
p.T3521A
DO52329
LIHC
ICGC
PTPVTS
DEG_SCF_FBW7_1
0.1111
p.V3511I
DO229050
LICA
ICGC
PTPVTS
DEG_SCF_FBW7_1
0.5965
p.P3510S
DO220875
MELA
ICGC
PTPVTS
DEG_SCF_FBW7_1
0.6752
p.P3510L
SIDM00689
B-Lymphoblastic Leukemia
GDSC
PTPVTS
DEG_SCF_FBW7_1
0.7582
p.P3510L
ACH-000151
Leukemia
CCLE
PTPVTS
DEG_SCF_FBW7_1
0.7582
p.P3510L
JM1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPVTS
DEG_SCF_FBW7_1
0.7582
p.T3506I
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
PTPVTS
DEG_SCF_FBW7_1
0.2778
p.T3506I
SIDM01622
Breast Carcinoma
GDSC
PTPVTS
DEG_SCF_FBW7_1
0.2778
p.T3506I
ACH-000647
Esophageal Cancer
CCLE
PTPVTS
DEG_SCF_FBW7_1
0.2778
p.T3506I
ACH-000721
Breast Cancer
CCLE
PTPVTS
DEG_SCF_FBW7_1
0.2778
p.T3506I
TE-1
oesophagus
COSMIC
PTPVTS
DEG_SCF_FBW7_1
0.2778
p.A3514V
ACH-002287
Colon/Colorectal Cancer
CCLE
PTPVTS
DEG_SCF_FBW7_1
0.3056
p.A3514V
NCI-H630
large_intestine
COSMIC
PTPVTS
DEG_SCF_FBW7_1
0.3056
p.A3505V
NCI-H630
large_intestine
COSMIC
PTPVTS
DEG_SCF_FBW7_1
0.25
Drug responses associated with HUWE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPVTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q01196
Runt-related transcription factor 1
DEG_SCF_FBW7_1
330:335
PTPVTS
FBXW7
0.9977
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SCF_FBW7_1
908:913
PTPVTS
FBXW7
0.9937
More...
Q7Z6Z7
E3 ubiquitin-protein ligase HUWE1
DEG_SCF_FBW7_1
3508:3513
PTPVTS
FBXW7
0.7023
More...