DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYTTS
Uniprot ID:
A0PJX4
Source protein:
Protein shisa-3 homolog
Source gene:
SHISA3
Class:
DEG_SPOP_SBC_1
Location:
195:199
E3 ligase:
SPOP
DEGRON score:
0.7875
ASA_SCORE:
79.84
COIL:
0.884
CONS_SCORE:
0.5965
DSS_SCORE:
0.4932
HELIX:
0.0566
FCONS_SCORE:
1.0549
RIG_SCORE:
0.6461
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T198N
TCGA-69-7978
LUAD
TCGA
PYTTS
DEG_SPOP_SBC_1
0.7055
p.T198N
DO24920
LUAD
ICGC
PYTTS
DEG_SPOP_SBC_1
0.7055
p.A205D
TCGA-A2-A0YF
BRCA
TCGA
PYTTS
DEG_SPOP_SBC_1
0.1667
p.A205D
DO1761
BRCA
ICGC
PYTTS
DEG_SPOP_SBC_1
0.1667
p.L204M
TCGA-B5-A1MX
UCEC
TCGA
PYTTS
DEG_SPOP_SBC_1
0.1944
p.L204M
DO41999
UCEC
ICGC
PYTTS
DEG_SPOP_SBC_1
0.1944
p.C187F
TCGA-D6-6826
HNSC
TCGA
PYTTS
DEG_SPOP_SBC_1
0.1111
p.C187F
DO15543
HNSC
ICGC
PYTTS
DEG_SPOP_SBC_1
0.1111
p.A205S
DO229015
LICA
ICGC
PYTTS
DEG_SPOP_SBC_1
0.1667
p.G186S
SIDM00845
Burkitt's Lymphoma
GDSC
PYTTS
DEG_SPOP_SBC_1
0.0833
p.H200R
SIDM00792
Small Cell Lung Carcinoma
GDSC
PYTTS
DEG_SPOP_SBC_1
0.3056
p.H200R
ACH-002170
Lung Cancer
CCLE
PYTTS
DEG_SPOP_SBC_1
0.3056
p.H200R
NCI-H1688
lung
COSMIC
PYTTS
DEG_SPOP_SBC_1
0.3056
p.L188P
ACH-000898
Gastric Cancer
CCLE
PYTTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with SHISA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94776
Metastasis-associated protein MTA2
DEG_SPOP_SBC_1
436:440
PYTTS
SPOP
0.9933
More...
Q9BZ29
Dedicator of cytokinesis protein 9
DEG_SPOP_SBC_1
1236:1240
PYTTS
SPOP
0.9991
More...
A0PJX4
Protein shisa-3 homolog
DEG_SPOP_SBC_1
195:199
PYTTS
SPOP
0.7875
More...