DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QKEND
Uniprot ID:
Q96SN8
Source protein:
CDK5 regulatory subunit-associated protein 2
Source gene:
CDK5RAP2
Class:
DEG_APCC_KENBOX_2
Location:
1474:1478
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7395
ASA_SCORE:
108.16
COIL:
0.067
CONS_SCORE:
0.5273
DSS_SCORE:
0.5584
HELIX:
0.9362
FCONS_SCORE:
1.4367
RIG_SCORE:
0.6975
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1469V
TCGA-24-2293
OV
TCGA
QKEND
DEG_APCC_KENBOX_2
0.1944
p.G1469V
DO28005
OV
ICGC
QKEND
DEG_APCC_KENBOX_2
0.1944
p.L1466V
DO233123
GACA
ICGC
QKEND
DEG_APCC_KENBOX_2
0.1111
p.A1464E
DO229026
LICA
ICGC
QKEND
DEG_APCC_KENBOX_2
0.0556
p.R1471I
DO229259
THCA
ICGC
QKEND
DEG_APCC_KENBOX_2
0.25
p.L1484I
SIDM00948
Burkitt's Lymphoma
GDSC
QKEND
DEG_APCC_KENBOX_2
0.1667
p.L1484I
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
QKEND
DEG_APCC_KENBOX_2
0.1667
p.M1465V
SIDM00479
Esophageal Carcinoma
GDSC
QKEND
DEG_APCC_KENBOX_2
0.0833
p.M1465V
ACH-000679
Esophageal Cancer
CCLE
QKEND
DEG_APCC_KENBOX_2
0.0833
p.M1465V
OE19
oesophagus
COSMIC
QKEND
DEG_APCC_KENBOX_2
0.0833
p.V1483I
REH
haematopoietic_and_lymphoid_tissue
COSMIC
QKEND
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with CDK5RAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N1H7
Protein SIX6OS1
DEG_APCC_KENBOX_2
318:322
QKEND
APC,CDC20,FZR1
0.8637
More...
Q96SN8
CDK5 regulatory subunit-associated protein 2
DEG_APCC_KENBOX_2
1474:1478
QKEND
APC,CDC20,FZR1
0.7395
More...
Q8N7Z5
Ankyrin repeat domain-containing protein 31
DEG_APCC_KENBOX_2
1560:1564
QKEND
APC,CDC20,FZR1
0.6997
More...