DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENE
Uniprot ID:
Q6P6B1
Source protein:
Glutamate-rich protein 5
Source gene:
ERICH5
Class:
DEG_APCC_KENBOX_2
Location:
222:226
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.993
ASA_SCORE:
112
COIL:
0.9166
CONS_SCORE:
0.8025
DSS_SCORE:
0.6358
HELIX:
0.0516
FCONS_SCORE:
1.0791
RIG_SCORE:
0.6889
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A215T
SIDM01011
B-Cell Non-Hodgkin's Lymphoma
GDSC
SKENE
DEG_APCC_KENBOX_2
0.1389
p.A215T
KARPAS-1106P
haematopoietic_and_lymphoid_tissue
COSMIC
SKENE
DEG_APCC_KENBOX_2
0.1389
p.E226D
SIDM00143
Small Cell Lung Carcinoma
GDSC
SKENE
DEG_APCC_KENBOX_2
0.5647
p.A215D
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
SKENE
DEG_APCC_KENBOX_2
0.1389
p.A215D
HCC-15
lung
COSMIC
SKENE
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with ERICH5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZH2
5'-3' exoribonuclease 1
DEG_APCC_KENBOX_2
1328:1332
SKENE
APC,CDC20,FZR1
0.9861
More...
Q9Y6X8
Zinc fingers and homeoboxes protein 2
DEG_APCC_KENBOX_2
55:59
SKENE
APC,CDC20,FZR1
0.7935
More...
Q6P6B1
Glutamate-rich protein 5
DEG_APCC_KENBOX_2
222:226
SKENE
APC,CDC20,FZR1
0.993
More...