DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENE
Uniprot ID:
Q9Y6X8
Source protein:
Zinc fingers and homeoboxes protein 2
Source gene:
ZHX2
Class:
DEG_APCC_KENBOX_2
Location:
55:59
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7935
ASA_SCORE:
114.18
COIL:
0.7388
CONS_SCORE:
0.2189
DSS_SCORE:
0.4952
HELIX:
0.2386
FCONS_SCORE:
0.8631
RIG_SCORE:
0.7169
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M66I
TCGA-66-2771
LUSC
TCGA
SKENE
DEG_APCC_KENBOX_2
0.1389
p.M66I
DO26870
LUSC
ICGC
SKENE
DEG_APCC_KENBOX_2
0.1389
p.S54C
TCGA-A8-A092
BRCA
TCGA
SKENE
DEG_APCC_KENBOX_2
0.3056
p.S54C
TCGA-AC-A23H
BRCA
TCGA
SKENE
DEG_APCC_KENBOX_2
0.3056
p.S54C
DO2401
BRCA
ICGC
SKENE
DEG_APCC_KENBOX_2
0.3056
p.S54C
DO4796
BRCA
ICGC
SKENE
DEG_APCC_KENBOX_2
0.3056
p.S54C
SIDM00895
B-Cell Non-Hodgkin's Lymphoma
GDSC
SKENE
DEG_APCC_KENBOX_2
0.3056
p.S54C
ACH-002215
Lymphoma
CCLE
SKENE
DEG_APCC_KENBOX_2
0.3056
p.S54C
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
SKENE
DEG_APCC_KENBOX_2
0.3056
p.E50K
TCGA-AC-A23H
BRCA
TCGA
SKENE
DEG_APCC_KENBOX_2
0.1944
p.E50K
DO2401
BRCA
ICGC
SKENE
DEG_APCC_KENBOX_2
0.1944
p.L51F
TCGA-AP-A1DK
UCEC
TCGA
SKENE
DEG_APCC_KENBOX_2
0.2222
p.L51F
DO42033
UCEC
ICGC
SKENE
DEG_APCC_KENBOX_2
0.2222
p.S65F
TCGA-BS-A0UV
UCEC
TCGA
SKENE
DEG_APCC_KENBOX_2
0.1667
p.S65F
DO42793
UCEC
ICGC
SKENE
DEG_APCC_KENBOX_2
0.1667
p.E68K
TCGA-EE-A3JI
SKCM
TCGA
SKENE
DEG_APCC_KENBOX_2
0.0833
p.E68K
DO47268
SKCM
ICGC
SKENE
DEG_APCC_KENBOX_2
0.0833
p.E59K
TCGA-L5-A8NM
ESCA
TCGA
SKENE
DEG_APCC_KENBOX_2
0.591
p.E62Q
TCGA-TN-A7HL
HNSC
TCGA
SKENE
DEG_APCC_KENBOX_2
0.25
p.E62Q
DO219080
HNSC
ICGC
SKENE
DEG_APCC_KENBOX_2
0.25
p.S54F
DO1076
BRCA
ICGC
SKENE
DEG_APCC_KENBOX_2
0.3056
p.E59G
DO45299
LIRI
ICGC
SKENE
DEG_APCC_KENBOX_2
0.6087
p.V63L
SIDM00516
Melanoma
GDSC
SKENE
DEG_APCC_KENBOX_2
0.2222
p.V63L
SIDM01879
Non-Cancerous
GDSC
SKENE
DEG_APCC_KENBOX_2
0.2222
p.V63L
ACH-002361
Non-Cancerous
CCLE
SKENE
DEG_APCC_KENBOX_2
0.2222
Drug responses associated with ZHX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZH2
5'-3' exoribonuclease 1
DEG_APCC_KENBOX_2
1328:1332
SKENE
APC,CDC20,FZR1
0.9861
More...
Q9Y6X8
Zinc fingers and homeoboxes protein 2
DEG_APCC_KENBOX_2
55:59
SKENE
APC,CDC20,FZR1
0.7935
More...
Q6P6B1
Glutamate-rich protein 5
DEG_APCC_KENBOX_2
222:226
SKENE
APC,CDC20,FZR1
0.993
More...