DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SVDTGE
Uniprot ID:
Q4KWH8
Source protein:
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
Source gene:
PLCH1
Class:
DEG_Kelch_Keap1_1
Location:
420:425
E3 ligase:
KEAP1
DEGRON score:
0.7587
ASA_SCORE:
75.7167
COIL:
0.8648
CONS_SCORE:
0.4702
DSS_SCORE:
0.3734
HELIX:
0.0655
FCONS_SCORE:
0.7453
RIG_SCORE:
0.7456
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S420F
TCGA-77-7140
LUSC
TCGA
SVDTGE
DEG_Kelch_Keap1_1
0.7982
p.S434N
TCGA-AH-6643
READ
TCGA
SVDTGE
DEG_Kelch_Keap1_1
0.0833
p.G410E
TCGA-FS-A4F5
SKCM
TCGA
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.E425Q
TCGA-MA-AA41
CESC
TCGA
SVDTGE
DEG_Kelch_Keap1_1
0.6744
p.G433R
DO219041
BLCA
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.1111
p.H431Q
DO231078
LUSC
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.1667
p.S416N
DO36591
READ
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.2222
p.H431Y
DO37734
SKCM
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.1667
p.L432I
DO219456
SKCM
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.1389
p.L417S
DO229248
THCA
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.25
p.G425S
DO42793
UCEC
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.6993
p.G433E
DO42793
UCEC
ICGC
SVDTGE
DEG_Kelch_Keap1_1
0.1111
p.G410R
SIDM00586
Hepatocellular Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00373
Endometrial Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00315
Glioblastoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM01005
Acute Myeloid Leukemia
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00465
Ovarian Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00355
Non-Small Cell Lung Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00214
Colorectal Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00997
Thyroid Gland Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G410R
SIDM00989
Bladder Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.0556
p.G424A
SIDM00054
Pancreatic Carcinoma
GDSC
SVDTGE
DEG_Kelch_Keap1_1
0.754
p.G424A
ACH-001619
Gallbladder Cancer
CCLE
SVDTGE
DEG_Kelch_Keap1_1
0.754
p.G424A
ACH-002185
Pancreatic Cancer
CCLE
SVDTGE
DEG_Kelch_Keap1_1
0.754
p.G424A
PL18
pancreas
COSMIC
SVDTGE
DEG_Kelch_Keap1_1
0.754
Drug responses associated with PLCH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SVDTGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q4KWH8
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
DEG_Kelch_Keap1_1
420:425
SVDTGE
KEAP1
0.7587
More...
Q9UPY3
Endoribonuclease Dicer
DEG_Kelch_Keap1_1
593:598
SVDTGE
KEAP1
0.744
More...
Q9Y6R4
Mitogen-activated protein kinase kinase kinase 4
DEG_Kelch_Keap1_1
1362:1367
SVDTGE
KEAP1
0.8216
More...