DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TKENV
Uniprot ID:
Q8NI27
Source protein:
THO complex subunit 2
Source gene:
THOC2
Class:
DEG_APCC_KENBOX_2
Location:
557:561
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5025
ASA_SCORE:
84.9
COIL:
0.537
CONS_SCORE:
0.5958
DSS_SCORE:
0.4193
HELIX:
0.4544
FCONS_SCORE:
1.0847
RIG_SCORE:
0.7873
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R555L
TCGA-49-AARE
LUAD
TCGA
TKENV
DEG_APCC_KENBOX_2
0.2778
p.R555C
TCGA-AX-A2HJ
UCEC
TCGA
TKENV
DEG_APCC_KENBOX_2
0.2778
p.I552M
TCGA-EK-A3GK
CESC
TCGA
TKENV
DEG_APCC_KENBOX_2
0.1944
p.L553Q
DO1118
BRCA
ICGC
TKENV
DEG_APCC_KENBOX_2
0.2222
p.I563V
DO14926
HNSC
ICGC
TKENV
DEG_APCC_KENBOX_2
0.2778
p.I563V
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
TKENV
DEG_APCC_KENBOX_2
0.2778
p.L561M
DO229026
LICA
ICGC
TKENV
DEG_APCC_KENBOX_2
0.711
p.A550V
DO41871
UCEC
ICGC
TKENV
DEG_APCC_KENBOX_2
0.25
p.L564F
DO52426
UCEC
ICGC
TKENV
DEG_APCC_KENBOX_2
0.6944
p.A555V
DO43971
UCEC
ICGC
TKENV
DEG_APCC_KENBOX_2
0.2778
p.P563S
SIDM00084
Glioblastoma
GDSC
TKENV
DEG_APCC_KENBOX_2
0.2778
p.P563S
ACH-000376
Brain Cancer
CCLE
TKENV
DEG_APCC_KENBOX_2
0.2778
p.P563S
SF295
central_nervous_system
COSMIC
TKENV
DEG_APCC_KENBOX_2
0.2778
p.V561M
ACH-000299
Leukemia
CCLE
TKENV
DEG_APCC_KENBOX_2
0.6097
p.A550T
CW-2
large_intestine
COSMIC
TKENV
DEG_APCC_KENBOX_2
0.25
Drug responses associated with THOC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O76070
Gamma-synuclein
DEG_APCC_KENBOX_2
44:48
TKENV
APC,CDC20,FZR1
0.9635
More...
Q8NI27
THO complex subunit 2
DEG_APCC_KENBOX_2
557:561
TKENV
APC,CDC20,FZR1
0.5025
More...
Q9GZU2
Paternally-expressed gene 3 protein
DEG_APCC_KENBOX_2
764:768
TKENV
APC,CDC20,FZR1
0.9993
More...