DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VHSTS
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_SPOP_SBC_1
Location:
1660:1664
E3 ligase:
SPOP
DEGRON score:
0.9899
ASA_SCORE:
88.74
COIL:
0.9184
CONS_SCORE:
0.4486
DSS_SCORE:
0.5619
HELIX:
0.0266
FCONS_SCORE:
0.9299
RIG_SCORE:
0.7143
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1667K
TCGA-29-1694
OV
TCGA
VHSTS
DEG_SPOP_SBC_1
0.25
p.G1668W
TCGA-66-2782
LUSC
TCGA
VHSTS
DEG_SPOP_SBC_1
0.2222
p.G1668W
DO26680
LUSC
ICGC
VHSTS
DEG_SPOP_SBC_1
0.2222
p.Q1652K
TCGA-EE-A2GK
SKCM
TCGA
VHSTS
DEG_SPOP_SBC_1
0.1111
p.T1656P
TCGA-EO-A22R
UCEC
TCGA
VHSTS
DEG_SPOP_SBC_1
0.2222
p.T1656P
DO42713
UCEC
ICGC
VHSTS
DEG_SPOP_SBC_1
0.2222
p.L1657S
DO222884
COCA
ICGC
VHSTS
DEG_SPOP_SBC_1
0.25
p.T1663I
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
VHSTS
DEG_SPOP_SBC_1
0.8189
p.T1663I
SIDM00493
Other Solid Cancers
GDSC
VHSTS
DEG_SPOP_SBC_1
0.8189
p.T1654I
ACH-001367
Neuroblastoma
CCLE
VHSTS
DEG_SPOP_SBC_1
0.2778
p.S1664L
A253
salivary_gland
COSMIC
VHSTS
DEG_SPOP_SBC_1
0.7667
p.S1664L
SKG-IIIa
cervix
COSMIC
VHSTS
DEG_SPOP_SBC_1
0.7667
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1660:1664
VHSTS
SPOP
0.9899
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
1555:1559
VHSTS
SPOP
0.989
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
1788:1792
VHSTS
SPOP
0.991
More...