DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VKENK
Uniprot ID:
Q9BXX2
Source protein:
Ankyrin repeat domain-containing protein 30B
Source gene:
ANKRD30B
Class:
DEG_APCC_KENBOX_2
Location:
1107:1111
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9176
ASA_SCORE:
105.56
COIL:
0.1996
CONS_SCORE:
0.366
DSS_SCORE:
0.173
HELIX:
0.8014
FCONS_SCORE:
1.2146
RIG_SCORE:
0.7906
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H1103Y
TCGA-06-0192
GBM
TCGA
VKENK
DEG_APCC_KENBOX_2
0.2222
p.H1103Y
DO13420
GBM
ICGC
VKENK
DEG_APCC_KENBOX_2
0.2222
p.K1117M
TCGA-38-4626
LUAD
TCGA
VKENK
DEG_APCC_KENBOX_2
0.2778
p.K1117M
DO24447
LUAD
ICGC
VKENK
DEG_APCC_KENBOX_2
0.2778
p.Y1112S
TCGA-44-7660
LUAD
TCGA
VKENK
DEG_APCC_KENBOX_2
0.75
p.Y1112S
DO23834
LUAD
ICGC
VKENK
DEG_APCC_KENBOX_2
0.75
p.I1118F
TCGA-D1-A17Q
UCEC
TCGA
VKENK
DEG_APCC_KENBOX_2
0.1389
p.I1118F
DO41903
UCEC
ICGC
VKENK
DEG_APCC_KENBOX_2
0.1389
p.K1108N
TCGA-EB-A24D
SKCM
TCGA
VKENK
DEG_APCC_KENBOX_2
0.6918
p.K1108N
DO37440
SKCM
ICGC
VKENK
DEG_APCC_KENBOX_2
0.6918
p.H1105P
TCGA-EE-A181
SKCM
TCGA
VKENK
DEG_APCC_KENBOX_2
0.2778
p.H1105P
DO37444
SKCM
ICGC
VKENK
DEG_APCC_KENBOX_2
0.2778
p.V1098I
TCGA-FS-A1ZF
SKCM
TCGA
VKENK
DEG_APCC_KENBOX_2
0.0833
p.V1098I
DO38039
SKCM
ICGC
VKENK
DEG_APCC_KENBOX_2
0.0833
p.K1117T
DO233732
GACA
ICGC
VKENK
DEG_APCC_KENBOX_2
0.2778
p.E1109K
DO220886
MELA
ICGC
VKENK
DEG_APCC_KENBOX_2
0.7022
p.E1109K
DO220903
MELA
ICGC
VKENK
DEG_APCC_KENBOX_2
0.7022
p.E1109K
DO222420
MELA
ICGC
VKENK
DEG_APCC_KENBOX_2
0.7022
p.L1101V
SIDM00328
Esophageal Squamous Cell Carcinoma
GDSC
VKENK
DEG_APCC_KENBOX_2
0.1667
p.L1101V
ACH-000605
Esophageal Cancer
CCLE
VKENK
DEG_APCC_KENBOX_2
0.1667
p.L1101V
TE-6
oesophagus
COSMIC
VKENK
DEG_APCC_KENBOX_2
0.1667
p.D1115Y
SIDM00264
Ewing's Sarcoma
GDSC
VKENK
DEG_APCC_KENBOX_2
0.2222
p.D1115Y
ACH-002105
Bone Cancer
CCLE
VKENK
DEG_APCC_KENBOX_2
0.2222
p.D1115Y
ES4
bone
COSMIC
VKENK
DEG_APCC_KENBOX_2
0.2222
p.H1103P
SIDM00356
Non-Small Cell Lung Carcinoma
GDSC
VKENK
DEG_APCC_KENBOX_2
0.2222
p.H1103P
ACH-000482
Lung Cancer
CCLE
VKENK
DEG_APCC_KENBOX_2
0.2222
p.H1103P
RERF-LC-KJ
lung
COSMIC
VKENK
DEG_APCC_KENBOX_2
0.2222
Drug responses associated with ANKRD30B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14966
Ras-related protein Rab-7L1
DEG_APCC_KENBOX_2
156:160
VKENK
APC,CDC20,FZR1
0.8907
More...
O75420
GRB10-interacting GYF protein 1
DEG_APCC_KENBOX_2
51:55
VKENK
APC,CDC20,FZR1
0.9245
More...
P63128
Endogenous retrovirus group K member 9 Pol protein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.525
More...
P62684
Endogenous retrovirus group K member 113 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.9925
More...
P63126
Endogenous retrovirus group K member 9 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.854
More...
P63130
Endogenous retrovirus group K member 7 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.9428
More...
P63145
Endogenous retrovirus group K member 24 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.8705
More...
P87889
Endogenous retrovirus group K member 10 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.9753
More...
Q7LDI9
Endogenous retrovirus group K member 6 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.8189
More...
Q9HDB9
Endogenous retrovirus group K member 5 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.9912
More...
Q9YNA8
Endogenous retrovirus group K member 19 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.9866
More...
P62683
Endogenous retrovirus group K member 21 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.8826
More...
P62685
Endogenous retrovirus group K member 8 Gag polyprotein
DEG_APCC_KENBOX_2
199:203
VKENK
APC,CDC20,FZR1
0.9243
More...
Q9BXX2
Ankyrin repeat domain-containing protein 30B
DEG_APCC_KENBOX_2
1107:1111
VKENK
APC,CDC20,FZR1
0.9176
More...