DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VKSTT
Uniprot ID:
P40692
Source protein:
DNA mismatch repair protein Mlh1
Source gene:
MLH1
Class:
DEG_SPOP_SBC_1
Location:
360:364
E3 ligase:
SPOP
DEGRON score:
0.9571
ASA_SCORE:
90.98
COIL:
0.8502
CONS_SCORE:
0.252
DSS_SCORE:
0.5575
HELIX:
0.0546
FCONS_SCORE:
0.8097
RIG_SCORE:
0.7088
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T364A
TCGA-EO-A3AY
UCEC
TCGA
VKSTT
DEG_SPOP_SBC_1
0.7139
p.S368L
TCGA-FW-A3R5
SKCM
TCGA
VKSTT
DEG_SPOP_SBC_1
0.2222
p.M360I
DO229031
LICA
ICGC
VKSTT
DEG_SPOP_SBC_1
0.7618
p.G373A
SIDM01123
Prostate Carcinoma
GDSC
VKSTT
DEG_SPOP_SBC_1
0.0833
p.G373A
ACH-000177
Prostate Cancer
CCLE
VKSTT
DEG_SPOP_SBC_1
0.0833
p.G373A
NCI-H660
prostate
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.0833
p.P362R
ES8
bone
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.7512
p.P362R
HT-1376
urinary_tract
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.7512
p.S374R
MRK-nu-1
breast
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.0556
p.E362A
786-0
kidney
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.7701
Drug responses associated with MLH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40692
DNA mismatch repair protein Mlh1
DEG_SPOP_SBC_1
360:364
VKSTT
SPOP
0.9571
More...
Q8NHM5
Lysine-specific demethylase 2B
DEG_SPOP_SBC_1
481:485
VKSTT
SPOP
0.9987
More...
Q9NQW6
Anillin
DEG_SPOP_SBC_1
297:301
VKSTT
SPOP
0.991
More...
Q9Y265
RuvB-like 1
DEG_SPOP_SBC_1
6:10
VKSTT
SPOP
0.8534
More...