DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
VKSTT
Uniprot ID:
Q9Y265
Source protein:
RuvB-like 1
Source gene:
RUVBL1
Class:
DEG_SPOP_SBC_1
Location:
6:10
E3 ligase:
SPOP
DEGRON score:
0.8534
ASA_SCORE:
89.92
COIL:
0.736
CONS_SCORE:
0.5552
DSS_SCORE:
0.6441
HELIX:
0.1178
FCONS_SCORE:
0.8382
RIG_SCORE:
0.7543
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R14H
TCGA-AP-A1DV
UCEC
TCGA
VKSTT
DEG_SPOP_SBC_1
0.2222
p.R14H
DO43186
UCEC
ICGC
VKSTT
DEG_SPOP_SBC_1
0.2222
p.E4D
TCGA-BT-A3PJ
BLCA
TCGA
VKSTT
DEG_SPOP_SBC_1
0.2778
p.E4D
DO44097
BLCA
ICGC
VKSTT
DEG_SPOP_SBC_1
0.2778
p.A16T
TCGA-VQ-A8P2
STAD
TCGA
VKSTT
DEG_SPOP_SBC_1
0.1667
p.A16T
DO51761
STAD
ICGC
VKSTT
DEG_SPOP_SBC_1
0.1667
p.E4Q
TCGA-XF-A8HE
BLCA
TCGA
VKSTT
DEG_SPOP_SBC_1
0.2778
p.E4Q
DO49797
BLCA
ICGC
VKSTT
DEG_SPOP_SBC_1
0.2778
p.E4Q
DO223157
ESCA
ICGC
VKSTT
DEG_SPOP_SBC_1
0.2778
p.R14S
DO229019
LICA
ICGC
VKSTT
DEG_SPOP_SBC_1
0.2222
p.I15M
SIDM00381
Cervical Carcinoma
GDSC
VKSTT
DEG_SPOP_SBC_1
0.1944
p.I15M
ACH-002020
Cervical Cancer
CCLE
VKSTT
DEG_SPOP_SBC_1
0.1944
p.I15M
SKG-IIIa
cervix
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.1944
p.A18D
ACH-000999
Colon/Colorectal Cancer
CCLE
VKSTT
DEG_SPOP_SBC_1
0.1111
p.A18D
SNU-1040
large_intestine
COSMIC
VKSTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with RUVBL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40692
DNA mismatch repair protein Mlh1
DEG_SPOP_SBC_1
360:364
VKSTT
SPOP
0.9571
More...
Q8NHM5
Lysine-specific demethylase 2B
DEG_SPOP_SBC_1
481:485
VKSTT
SPOP
0.9987
More...
Q9NQW6
Anillin
DEG_SPOP_SBC_1
297:301
VKSTT
SPOP
0.991
More...
Q9Y265
RuvB-like 1
DEG_SPOP_SBC_1
6:10
VKSTT
SPOP
0.8534
More...