DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VMTSS
Uniprot ID:
Q9NZQ3
Source protein:
NCK-interacting protein with SH3 domain
Source gene:
NCKIPSD
Class:
DEG_SPOP_SBC_1
Location:
116:120
E3 ligase:
SPOP
DEGRON score:
0.9946
ASA_SCORE:
85.12
COIL:
0.9108
CONS_SCORE:
0.3302
DSS_SCORE:
0.5778
HELIX:
0.0316
FCONS_SCORE:
1.0152
RIG_SCORE:
0.6393
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D123E
TCGA-06-5858
GBM
TCGA
VMTSS
DEG_SPOP_SBC_1
0.25
p.D123E
DO10892
GBM
ICGC
VMTSS
DEG_SPOP_SBC_1
0.25
p.D123N
TCGA-AN-A0XW
BRCA
TCGA
VMTSS
DEG_SPOP_SBC_1
0.25
p.D123N
DO225258
BRCA
ICGC
VMTSS
DEG_SPOP_SBC_1
0.25
p.D123N
DO1873
BRCA
ICGC
VMTSS
DEG_SPOP_SBC_1
0.25
p.S112F
DO220878
MELA
ICGC
VMTSS
DEG_SPOP_SBC_1
0.2222
p.R106C
SIDM01013
B-Cell Non-Hodgkin's Lymphoma
GDSC
VMTSS
DEG_SPOP_SBC_1
0.0556
Showing 1 to 7 of 7 entries
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Drug responses associated with NCKIPSD mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VMTSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
2029:2033
VMTSS
SPOP
0.9021
More...
Q9NZQ3
NCK-interacting protein with SH3 domain
DEG_SPOP_SBC_1
116:120
VMTSS
SPOP
0.9946
More...
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
2293:2297
VMTSS
SPOP
0.8434
More...
Showing 1 to 3 of 3 entries
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