DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTST
Uniprot ID:
Q2TAC2
Source protein:
Coiled-coil domain-containing protein 57
Source gene:
CCDC57
Class:
DEG_SPOP_SBC_1
Location:
620:624
E3 ligase:
SPOP
DEGRON score:
0.5097
ASA_SCORE:
100.66
COIL:
0.7762
CONS_SCORE:
0.2439
DSS_SCORE:
0.7452
HELIX:
0.21
FCONS_SCORE:
0.9549
RIG_SCORE:
0.633
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S619T
TCGA-A4-7828
KIRP
TCGA
VRTST
DEG_SPOP_SBC_1
0.3056
p.S619T
DO20760
KIRP
ICGC
VRTST
DEG_SPOP_SBC_1
0.3056
p.G634D
TCGA-CV-A6K2
HNSC
TCGA
VRTST
DEG_SPOP_SBC_1
0.0556
p.G634D
DO52079
HNSC
ICGC
VRTST
DEG_SPOP_SBC_1
0.0556
p.Q632K
TCGA-FS-A1Z4
SKCM
TCGA
VRTST
DEG_SPOP_SBC_1
0.1111
p.Q632K
DO37462
SKCM
ICGC
VRTST
DEG_SPOP_SBC_1
0.1111
p.S630Y
DO229045
LICA
ICGC
VRTST
DEG_SPOP_SBC_1
0.1667
p.S619I
DO232224
PBCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.3056
p.R621C
DO229216
THCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.719
p.T626M
SIDM01263
T-Lymphoblastic Leukemia
GDSC
VRTST
DEG_SPOP_SBC_1
0.2778
p.T626M
SIDM00203
Ewing's Sarcoma
GDSC
VRTST
DEG_SPOP_SBC_1
0.2778
p.V620G
SIDM01190
Bladder Carcinoma
GDSC
VRTST
DEG_SPOP_SBC_1
0.7532
p.V620G
ACH-000720
Bladder Cancer
CCLE
VRTST
DEG_SPOP_SBC_1
0.7532
p.V620G
TCCSUP
urinary_tract
COSMIC
VRTST
DEG_SPOP_SBC_1
0.7532
Drug responses associated with CCDC57 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2TAC2
Coiled-coil domain-containing protein 57
DEG_SPOP_SBC_1
620:624
VRTST
SPOP
0.5097
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
144:148
VRTST
SPOP
0.9891
More...
Q9UK17
Potassium voltage-gated channel subfamily D member 3
DEG_SPOP_SBC_1
500:504
VRTST
SPOP
0.8401
More...